Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
P04224 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04224 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04224 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04224 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04224 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04224 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
P04224 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
P04224 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.24□□□□□ -0.61
P04224 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
P04224 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04224 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04224 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04224 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04224 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
P04224 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.23□□□□□ -0.61
P04224 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.23□□□□□ -0.61
P04224 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04224 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04224 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.23□□□□□ -0.61
P04224 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04224 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04224 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04224 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.23□□□□□ -0.61
P04224 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04224 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04224 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.23□□□□□ -0.61
P04224 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
P04224 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
P04224 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
P04224 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
P04224 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC11.23□□□□□ -0.61
P04224 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
P04224 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
P04224 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
P04224 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
P04224 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC11.23□□□□□ -0.61
P04224 Gm10766-202ENSMUST00000194123 606 ntBASIC11.23□□□□□ -0.61
P04224 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04224 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04224 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04224 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
P04224 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
P04224 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
P04224 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04224 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04224 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
P04224 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04224 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
P04224 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.23□□□□□ -0.61
P04224 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
P04224 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04224 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
P04224 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04224 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04224 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04224 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.23□□□□□ -0.61
P04224 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
P04224 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
P04224 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
P04224 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
P04224 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04224 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04224 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.22□□□□□ -0.61
P04224 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
P04224 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
P04224 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P04224 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P04224 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P04224 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC11.22□□□□□ -0.61
P04224 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
P04224 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
P04224 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P04224 Gm6912-201ENSMUST00000117218 544 ntBASIC11.22□□□□□ -0.61
P04224 Gm12585-201ENSMUST00000117307 290 ntBASIC11.22□□□□□ -0.61
P04224 Gm15693-201ENSMUST00000120470 637 ntBASIC11.22□□□□□ -0.61
P04224 Gm7820-201ENSMUST00000121012 1052 ntBASIC11.22□□□□□ -0.61
P04224 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
P04224 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC11.22□□□□□ -0.61
P04224 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P04224 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC11.22□□□□□ -0.61
P04224 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
P04224 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC11.22□□□□□ -0.61
P04224 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC11.22□□□□□ -0.61
P04224 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
P04224 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
P04224 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
P04224 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC11.22□□□□□ -0.61
P04224 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.22□□□□□ -0.61
P04224 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P04224 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P04224 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.22□□□□□ -0.61
P04224 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P04224 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
P04224 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P04224 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
P04224 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P04224 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
P04224 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
P04224 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms