Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CopeO89079 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.17□□□□□ -0.3
CopeO89079 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CopeO89079 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CopeO89079 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CopeO89079 Mir6956-201ENSMUST00000183598 62 ntBASIC13.17□□□□□ -0.3
CopeO89079 Gm44397-201ENSMUST00000195950 113 ntBASIC13.17□□□□□ -0.3
CopeO89079 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.17□□□□□ -0.3
CopeO89079 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.17□□□□□ -0.3
CopeO89079 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CopeO89079 Gm6983-201ENSMUST00000214912 628 ntBASIC13.17□□□□□ -0.3
CopeO89079 Gm19220-201ENSMUST00000222682 803 ntBASIC13.17□□□□□ -0.3
CopeO89079 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.17□□□□□ -0.3
CopeO89079 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CopeO89079 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC13.17□□□□□ -0.3
CopeO89079 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CopeO89079 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CopeO89079 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CopeO89079 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CopeO89079 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CopeO89079 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CopeO89079 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.17□□□□□ -0.3
CopeO89079 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CopeO89079 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CopeO89079 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CopeO89079 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CopeO89079 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CopeO89079 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CopeO89079 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CopeO89079 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CopeO89079 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.17□□□□□ -0.3
CopeO89079 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CopeO89079 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CopeO89079 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CopeO89079 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CopeO89079 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.16□□□□□ -0.3
CopeO89079 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.16□□□□□ -0.3
CopeO89079 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CopeO89079 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CopeO89079 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CopeO89079 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CopeO89079 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CopeO89079 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.16□□□□□ -0.3
CopeO89079 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CopeO89079 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CopeO89079 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CopeO89079 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CopeO89079 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC13.16□□□□□ -0.3
CopeO89079 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
CopeO89079 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CopeO89079 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
CopeO89079 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CopeO89079 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CopeO89079 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CopeO89079 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.16□□□□□ -0.3
CopeO89079 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.16□□□□□ -0.3
CopeO89079 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.16□□□□□ -0.3
CopeO89079 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CopeO89079 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.16□□□□□ -0.3
CopeO89079 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CopeO89079 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
CopeO89079 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CopeO89079 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CopeO89079 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CopeO89079 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.16□□□□□ -0.3
CopeO89079 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CopeO89079 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CopeO89079 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CopeO89079 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CopeO89079 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.16□□□□□ -0.3
CopeO89079 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.16□□□□□ -0.3
CopeO89079 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CopeO89079 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CopeO89079 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CopeO89079 Syt7-204ENSMUST00000223586 1344 ntBASIC13.15□□□□□ -0.3
CopeO89079 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CopeO89079 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CopeO89079 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CopeO89079 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CopeO89079 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CopeO89079 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CopeO89079 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CopeO89079 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.15□□□□□ -0.3
CopeO89079 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CopeO89079 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CopeO89079 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CopeO89079 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.15□□□□□ -0.3
CopeO89079 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CopeO89079 Gm42612-201ENSMUST00000197986 623 ntBASIC13.15□□□□□ -0.3
CopeO89079 Gm43170-201ENSMUST00000199827 612 ntBASIC13.15□□□□□ -0.3
CopeO89079 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CopeO89079 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.15□□□□□ -0.3
CopeO89079 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.15□□□□□ -0.3
CopeO89079 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CopeO89079 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CopeO89079 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CopeO89079 Gm16372-201ENSMUST00000073088 450 ntBASIC13.15□□□□□ -0.3
CopeO89079 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CopeO89079 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.15□□□□□ -0.3
CopeO89079 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms