Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Limk2O54785 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Limk2O54785 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Limk2O54785 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Limk2O54785 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Limk2O54785 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Limk2O54785 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Limk2O54785 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Limk2O54785 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.98□□□□□ -0.33
Limk2O54785 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.98□□□□□ -0.33
Limk2O54785 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Limk2O54785 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Limk2O54785 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Limk2O54785 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Limk2O54785 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Limk2O54785 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Limk2O54785 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Limk2O54785 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Limk2O54785 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Limk2O54785 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Limk2O54785 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Limk2O54785 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Limk2O54785 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Limk2O54785 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Limk2O54785 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Limk2O54785 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.97□□□□□ -0.33
Limk2O54785 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Limk2O54785 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Limk2O54785 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Limk2O54785 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Limk2O54785 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Limk2O54785 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.97□□□□□ -0.33
Limk2O54785 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.97□□□□□ -0.33
Limk2O54785 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Limk2O54785 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Limk2O54785 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Limk2O54785 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.97□□□□□ -0.33
Limk2O54785 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Limk2O54785 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Limk2O54785 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Limk2O54785 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.97□□□□□ -0.33
Limk2O54785 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Limk2O54785 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.97□□□□□ -0.33
Limk2O54785 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.97□□□□□ -0.33
Limk2O54785 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Limk2O54785 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Limk2O54785 Gm10608-202ENSMUST00000213924 676 ntBASIC12.97□□□□□ -0.33
Limk2O54785 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Limk2O54785 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Limk2O54785 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Limk2O54785 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Limk2O54785 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Limk2O54785 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.97□□□□□ -0.33
Limk2O54785 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Limk2O54785 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.97□□□□□ -0.33
Limk2O54785 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Limk2O54785 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Limk2O54785 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Limk2O54785 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Limk2O54785 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.97□□□□□ -0.33
Limk2O54785 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Limk2O54785 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Limk2O54785 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Limk2O54785 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.96□□□□□ -0.33
Limk2O54785 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Limk2O54785 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Limk2O54785 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Limk2O54785 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.96□□□□□ -0.33
Limk2O54785 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Limk2O54785 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Limk2O54785 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Limk2O54785 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.96□□□□□ -0.33
Limk2O54785 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Limk2O54785 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Limk2O54785 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Limk2O54785 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Limk2O54785 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Limk2O54785 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Limk2O54785 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Limk2O54785 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Limk2O54785 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.96□□□□□ -0.33
Limk2O54785 Gm13786-201ENSMUST00000122371 333 ntBASIC12.96□□□□□ -0.33
Limk2O54785 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.96□□□□□ -0.33
Limk2O54785 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.96□□□□□ -0.33
Limk2O54785 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Limk2O54785 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Limk2O54785 Gm27320-201ENSMUST00000184892 109 ntBASIC12.96□□□□□ -0.33
Limk2O54785 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.96□□□□□ -0.33
Limk2O54785 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.96□□□□□ -0.33
Limk2O54785 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Limk2O54785 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.96□□□□□ -0.33
Limk2O54785 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Limk2O54785 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.96□□□□□ -0.33
Limk2O54785 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.96□□□□□ -0.33
Limk2O54785 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Limk2O54785 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Limk2O54785 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Limk2O54785 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Limk2O54785 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Limk2O54785 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms