Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ebf3O08791 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ebf3O08791 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.29□□□□□ -0.28
Ebf3O08791 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Ebf3O08791 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ebf3O08791 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ebf3O08791 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Ebf3O08791 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf3O08791 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf3O08791 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf3O08791 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ebf3O08791 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf3O08791 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf3O08791 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf3O08791 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.28□□□□□ -0.28
Ebf3O08791 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf3O08791 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf3O08791 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Ebf3O08791 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf3O08791 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf3O08791 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf3O08791 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf3O08791 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf3O08791 Gm12997-201ENSMUST00000120207 640 ntBASIC13.28□□□□□ -0.28
Ebf3O08791 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.28□□□□□ -0.28
Ebf3O08791 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf3O08791 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ebf3O08791 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.28□□□□□ -0.28
Ebf3O08791 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.28□□□□□ -0.28
Ebf3O08791 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.28□□□□□ -0.28
Ebf3O08791 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Ebf3O08791 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.28□□□□□ -0.28
Ebf3O08791 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.28□□□□□ -0.28
Ebf3O08791 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf3O08791 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf3O08791 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Ebf3O08791 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Ebf3O08791 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf3O08791 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf3O08791 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ebf3O08791 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
Ebf3O08791 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.28□□□□□ -0.28
Ebf3O08791 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf3O08791 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf3O08791 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.28□□□□□ -0.28
Ebf3O08791 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf3O08791 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf3O08791 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Ebf3O08791 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf3O08791 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf3O08791 Gm6015-201ENSMUST00000217493 1586 ntBASIC13.28□□□□□ -0.28
Ebf3O08791 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf3O08791 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf3O08791 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf3O08791 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ebf3O08791 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.28□□□□□ -0.28
Ebf3O08791 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.27□□□□□ -0.28
Ebf3O08791 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ebf3O08791 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ebf3O08791 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ebf3O08791 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
Ebf3O08791 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ebf3O08791 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.27□□□□□ -0.28
Ebf3O08791 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Ebf3O08791 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ebf3O08791 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.27□□□□□ -0.29
Ebf3O08791 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.27□□□□□ -0.29
Ebf3O08791 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.27□□□□□ -0.29
Ebf3O08791 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ebf3O08791 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ebf3O08791 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.27□□□□□ -0.29
Ebf3O08791 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.27□□□□□ -0.29
Ebf3O08791 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ebf3O08791 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.27□□□□□ -0.29
Ebf3O08791 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ebf3O08791 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ebf3O08791 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ebf3O08791 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.27□□□□□ -0.29
Ebf3O08791 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.27□□□□□ -0.29
Ebf3O08791 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ebf3O08791 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.27□□□□□ -0.29
Ebf3O08791 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Ebf3O08791 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ebf3O08791 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ebf3O08791 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ebf3O08791 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ebf3O08791 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ebf3O08791 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Ebf3O08791 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ebf3O08791 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ebf3O08791 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ebf3O08791 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ebf3O08791 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf3O08791 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf3O08791 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf3O08791 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf3O08791 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf3O08791 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ebf3O08791 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ebf3O08791 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms