Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Gm18304-201ENSMUST00000189162 546 ntBASIC15.3■□□□□ 0.04
Ube4aE9Q735 Ighv5-7-201ENSMUST00000192302 244 ntBASIC15.3■□□□□ 0.04
Ube4aE9Q735 Gm9333-201ENSMUST00000205452 1323 ntBASIC15.3■□□□□ 0.04
Ube4aE9Q735 Gm19187-201ENSMUST00000206781 892 ntBASIC15.3■□□□□ 0.04
Ube4aE9Q735 Gm45433-201ENSMUST00000209386 247 ntBASIC15.3■□□□□ 0.04
Ube4aE9Q735 Gm45598-202ENSMUST00000210719 986 ntBASIC15.3■□□□□ 0.04
Ube4aE9Q735 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC15.3■□□□□ 0.04
Ube4aE9Q735 Aprt-ps-201ENSMUST00000212311 505 ntBASIC15.3■□□□□ 0.04
Ube4aE9Q735 Abhd11os-203ENSMUST00000222613 363 ntBASIC15.3■□□□□ 0.04
Ube4aE9Q735 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Ube4aE9Q735 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube4aE9Q735 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube4aE9Q735 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube4aE9Q735 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube4aE9Q735 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ube4aE9Q735 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ube4aE9Q735 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube4aE9Q735 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube4aE9Q735 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC15.3■□□□□ 0.04
Ube4aE9Q735 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube4aE9Q735 Gm5939-201ENSMUST00000119613 2874 ntBASIC15.3■□□□□ 0.04
Ube4aE9Q735 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ube4aE9Q735 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC15.3■□□□□ 0.04
Ube4aE9Q735 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC15.29■□□□□ 0.04
Ube4aE9Q735 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ube4aE9Q735 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Ube4aE9Q735 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube4aE9Q735 Gm37437-201ENSMUST00000194451 1937 ntBASIC15.29■□□□□ 0.04
Ube4aE9Q735 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube4aE9Q735 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube4aE9Q735 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube4aE9Q735 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ube4aE9Q735 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube4aE9Q735 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube4aE9Q735 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube4aE9Q735 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube4aE9Q735 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube4aE9Q735 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube4aE9Q735 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Ube4aE9Q735 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube4aE9Q735 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC15.29■□□□□ 0.04
Ube4aE9Q735 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ube4aE9Q735 Gm25732-201ENSMUST00000175168 60 ntBASIC15.29■□□□□ 0.04
Ube4aE9Q735 Gm28450-201ENSMUST00000187349 638 ntBASIC15.29■□□□□ 0.04
Ube4aE9Q735 Gm7003-201ENSMUST00000195089 312 ntBASIC15.29■□□□□ 0.04
Ube4aE9Q735 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC15.29■□□□□ 0.04
Ube4aE9Q735 Gm10371-202ENSMUST00000228010 1081 ntBASIC15.29■□□□□ 0.04
Ube4aE9Q735 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube4aE9Q735 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC15.29■□□□□ 0.04
Ube4aE9Q735 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ube4aE9Q735 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube4aE9Q735 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ube4aE9Q735 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube4aE9Q735 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube4aE9Q735 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Ube4aE9Q735 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube4aE9Q735 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ube4aE9Q735 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ube4aE9Q735 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube4aE9Q735 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Ube4aE9Q735 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube4aE9Q735 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC15.28■□□□□ 0.04
Ube4aE9Q735 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ube4aE9Q735 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube4aE9Q735 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ube4aE9Q735 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube4aE9Q735 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC15.28■□□□□ 0.04
Ube4aE9Q735 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ube4aE9Q735 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube4aE9Q735 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC15.28■□□□□ 0.04
Ube4aE9Q735 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ube4aE9Q735 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube4aE9Q735 Mir6979-201ENSMUST00000183927 56 ntBASIC15.28■□□□□ 0.04
Ube4aE9Q735 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Ube4aE9Q735 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube4aE9Q735 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube4aE9Q735 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube4aE9Q735 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube4aE9Q735 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ube4aE9Q735 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube4aE9Q735 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC15.28■□□□□ 0.04
Ube4aE9Q735 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube4aE9Q735 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube4aE9Q735 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube4aE9Q735 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube4aE9Q735 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube4aE9Q735 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube4aE9Q735 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ube4aE9Q735 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ube4aE9Q735 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Ube4aE9Q735 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ube4aE9Q735 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ube4aE9Q735 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ube4aE9Q735 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ube4aE9Q735 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ube4aE9Q735 Gm8617-201ENSMUST00000118796 2222 ntBASIC15.27■□□□□ 0.04
Ube4aE9Q735 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ube4aE9Q735 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ube4aE9Q735 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ube4aE9Q735 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms