Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdh17E9PXF0 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh17E9PXF0 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.92□□□□□ -0.5
Pcdh17E9PXF0 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh17E9PXF0 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.92□□□□□ -0.5
Pcdh17E9PXF0 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh17E9PXF0 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh17E9PXF0 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh17E9PXF0 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh17E9PXF0 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh17E9PXF0 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh17E9PXF0 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh17E9PXF0 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh17E9PXF0 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh17E9PXF0 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh17E9PXF0 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh17E9PXF0 Snord83b-201ENSMUST00000104546 94 ntBASIC11.92□□□□□ -0.5
Pcdh17E9PXF0 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.92□□□□□ -0.5
Pcdh17E9PXF0 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.92□□□□□ -0.5
Pcdh17E9PXF0 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh17E9PXF0 Gm22121-201ENSMUST00000175148 54 ntBASIC11.92□□□□□ -0.5
Pcdh17E9PXF0 Gm27320-201ENSMUST00000184892 109 ntBASIC11.92□□□□□ -0.5
Pcdh17E9PXF0 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.92□□□□□ -0.5
Pcdh17E9PXF0 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.92□□□□□ -0.5
Pcdh17E9PXF0 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.92□□□□□ -0.5
Pcdh17E9PXF0 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh17E9PXF0 Morn2-202ENSMUST00000227729 656 ntBASIC11.92□□□□□ -0.5
Pcdh17E9PXF0 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh17E9PXF0 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh17E9PXF0 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Pcdh17E9PXF0 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh17E9PXF0 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Pcdh17E9PXF0 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh17E9PXF0 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh17E9PXF0 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Pcdh17E9PXF0 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh17E9PXF0 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdh17E9PXF0 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Pcdh17E9PXF0 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 Gm15236-201ENSMUST00000117309 379 ntBASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 Gm14381-201ENSMUST00000122105 414 ntBASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 Mir7221-201ENSMUST00000184009 72 ntBASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 Gm18056-201ENSMUST00000207670 568 ntBASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 Gm18061-201ENSMUST00000208350 562 ntBASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 Gm18063-201ENSMUST00000208529 568 ntBASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 Gm18052-201ENSMUST00000208750 559 ntBASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.91□□□□□ -0.5
Pcdh17E9PXF0 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh17E9PXF0 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh17E9PXF0 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh17E9PXF0 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh17E9PXF0 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh17E9PXF0 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh17E9PXF0 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh17E9PXF0 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pcdh17E9PXF0 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Pcdh17E9PXF0 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms