Protein–RNA interactions for Protein: D3YXE9

BC048679, cDNA sequence BC048679, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC048679D3YXE9 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
BC048679D3YXE9 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
BC048679D3YXE9 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
BC048679D3YXE9 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
BC048679D3YXE9 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
BC048679D3YXE9 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
BC048679D3YXE9 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
BC048679D3YXE9 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
BC048679D3YXE9 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
BC048679D3YXE9 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
BC048679D3YXE9 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
BC048679D3YXE9 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC10.72□□□□□ -0.69
BC048679D3YXE9 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
BC048679D3YXE9 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
BC048679D3YXE9 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
BC048679D3YXE9 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
BC048679D3YXE9 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
BC048679D3YXE9 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
BC048679D3YXE9 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
BC048679D3YXE9 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
BC048679D3YXE9 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
BC048679D3YXE9 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
BC048679D3YXE9 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
BC048679D3YXE9 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
BC048679D3YXE9 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
BC048679D3YXE9 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
BC048679D3YXE9 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
BC048679D3YXE9 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
BC048679D3YXE9 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
BC048679D3YXE9 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
BC048679D3YXE9 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
BC048679D3YXE9 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
BC048679D3YXE9 Gm12416-201ENSMUST00000120911 1008 ntBASIC10.71□□□□□ -0.69
BC048679D3YXE9 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC10.71□□□□□ -0.69
BC048679D3YXE9 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
BC048679D3YXE9 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC10.71□□□□□ -0.69
BC048679D3YXE9 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
BC048679D3YXE9 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
BC048679D3YXE9 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC10.71□□□□□ -0.69
BC048679D3YXE9 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
BC048679D3YXE9 Gm28760-201ENSMUST00000185995 736 ntBASIC10.71□□□□□ -0.69
BC048679D3YXE9 Gm42550-201ENSMUST00000201553 960 ntBASIC10.71□□□□□ -0.69
BC048679D3YXE9 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
BC048679D3YXE9 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
BC048679D3YXE9 AC123834.1-201ENSMUST00000225346 2043 ntBASIC10.71□□□□□ -0.69
BC048679D3YXE9 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
BC048679D3YXE9 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
BC048679D3YXE9 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
BC048679D3YXE9 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
BC048679D3YXE9 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
BC048679D3YXE9 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
BC048679D3YXE9 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
BC048679D3YXE9 Rn7sk-201ENSMUST00000083103 331 ntBASIC10.71□□□□□ -0.69
BC048679D3YXE9 Gm26315-201ENSMUST00000083890 321 ntBASIC10.71□□□□□ -0.69
BC048679D3YXE9 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
BC048679D3YXE9 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
BC048679D3YXE9 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
BC048679D3YXE9 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
BC048679D3YXE9 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
BC048679D3YXE9 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
BC048679D3YXE9 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
BC048679D3YXE9 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
BC048679D3YXE9 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.7
BC048679D3YXE9 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
BC048679D3YXE9 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.7
BC048679D3YXE9 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.71□□□□□ -0.7
BC048679D3YXE9 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
BC048679D3YXE9 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
BC048679D3YXE9 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
BC048679D3YXE9 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
BC048679D3YXE9 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
BC048679D3YXE9 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
BC048679D3YXE9 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
BC048679D3YXE9 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
BC048679D3YXE9 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
BC048679D3YXE9 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
BC048679D3YXE9 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
BC048679D3YXE9 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC10.7□□□□□ -0.7
BC048679D3YXE9 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
BC048679D3YXE9 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
BC048679D3YXE9 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
BC048679D3YXE9 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
BC048679D3YXE9 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
BC048679D3YXE9 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
BC048679D3YXE9 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC10.7□□□□□ -0.7
BC048679D3YXE9 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
BC048679D3YXE9 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC10.7□□□□□ -0.7
BC048679D3YXE9 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
BC048679D3YXE9 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
BC048679D3YXE9 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
BC048679D3YXE9 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
BC048679D3YXE9 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC10.7□□□□□ -0.7
BC048679D3YXE9 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC10.7□□□□□ -0.7
BC048679D3YXE9 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
BC048679D3YXE9 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
BC048679D3YXE9 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC10.7□□□□□ -0.7
BC048679D3YXE9 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
BC048679D3YXE9 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
BC048679D3YXE9 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
BC048679D3YXE9 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms