Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc112A0AUP1 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc112A0AUP1 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc112A0AUP1 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc112A0AUP1 Gm5780-201ENSMUST00000217774 1834 ntBASIC14.58□□□□□ -0.08
Ccdc112A0AUP1 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc112A0AUP1 Gm13612-201ENSMUST00000119276 390 ntBASIC14.58□□□□□ -0.08
Ccdc112A0AUP1 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.58□□□□□ -0.08
Ccdc112A0AUP1 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.58□□□□□ -0.08
Ccdc112A0AUP1 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC14.58□□□□□ -0.08
Ccdc112A0AUP1 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc112A0AUP1 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc112A0AUP1 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.58□□□□□ -0.08
Ccdc112A0AUP1 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.58□□□□□ -0.08
Ccdc112A0AUP1 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.58□□□□□ -0.08
Ccdc112A0AUP1 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.58□□□□□ -0.08
Ccdc112A0AUP1 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc112A0AUP1 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.58□□□□□ -0.08
Ccdc112A0AUP1 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.58□□□□□ -0.08
Ccdc112A0AUP1 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc112A0AUP1 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Ccdc112A0AUP1 Matn2-203ENSMUST00000226766 3252 ntBASIC14.58□□□□□ -0.08
Ccdc112A0AUP1 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc112A0AUP1 Zfp125-201ENSMUST00000079237 2488 ntBASIC14.58□□□□□ -0.08
Ccdc112A0AUP1 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc112A0AUP1 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc112A0AUP1 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Ccdc112A0AUP1 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Ccdc112A0AUP1 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc112A0AUP1 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc112A0AUP1 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc112A0AUP1 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc112A0AUP1 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ccdc112A0AUP1 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Ccdc112A0AUP1 Gm27177-202ENSMUST00000183514 2703 ntBASIC14.57□□□□□ -0.08
Ccdc112A0AUP1 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc112A0AUP1 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc112A0AUP1 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc112A0AUP1 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc112A0AUP1 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc112A0AUP1 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC14.57□□□□□ -0.08
Ccdc112A0AUP1 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc112A0AUP1 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc112A0AUP1 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Ccdc112A0AUP1 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Ccdc112A0AUP1 Gm8805-201ENSMUST00000117848 313 ntBASIC14.57□□□□□ -0.08
Ccdc112A0AUP1 Gm14921-201ENSMUST00000118643 908 ntBASIC14.57□□□□□ -0.08
Ccdc112A0AUP1 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Ccdc112A0AUP1 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc112A0AUP1 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.57□□□□□ -0.08
Ccdc112A0AUP1 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Ccdc112A0AUP1 Gm27701-201ENSMUST00000184498 110 ntBASIC14.57□□□□□ -0.08
Ccdc112A0AUP1 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc112A0AUP1 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc112A0AUP1 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc112A0AUP1 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Ccdc112A0AUP1 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Ccdc112A0AUP1 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc112A0AUP1 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
Ccdc112A0AUP1 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc112A0AUP1 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc112A0AUP1 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc112A0AUP1 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc112A0AUP1 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc112A0AUP1 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc112A0AUP1 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc112A0AUP1 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.57□□□□□ -0.08
Ccdc112A0AUP1 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC14.57□□□□□ -0.08
Ccdc112A0AUP1 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc112A0AUP1 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc112A0AUP1 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc112A0AUP1 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc112A0AUP1 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc112A0AUP1 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc112A0AUP1 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.56□□□□□ -0.08
Ccdc112A0AUP1 Gm18263-201ENSMUST00000220846 1928 ntBASIC14.56□□□□□ -0.08
Ccdc112A0AUP1 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc112A0AUP1 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ccdc112A0AUP1 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.56□□□□□ -0.08
Ccdc112A0AUP1 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc112A0AUP1 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC14.56□□□□□ -0.08
Ccdc112A0AUP1 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc112A0AUP1 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc112A0AUP1 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14.56□□□□□ -0.08
Ccdc112A0AUP1 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc112A0AUP1 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc112A0AUP1 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc112A0AUP1 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc112A0AUP1 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc112A0AUP1 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc112A0AUP1 Gm13123-201ENSMUST00000122173 492 ntBASIC14.56□□□□□ -0.08
Ccdc112A0AUP1 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc112A0AUP1 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc112A0AUP1 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc112A0AUP1 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc112A0AUP1 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC14.56□□□□□ -0.08
Ccdc112A0AUP1 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.56□□□□□ -0.08
Ccdc112A0AUP1 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.56□□□□□ -0.08
Ccdc112A0AUP1 Gm8598-201ENSMUST00000221184 836 ntBASIC14.56□□□□□ -0.08
Ccdc112A0AUP1 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms