Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm15321-201ENSMUST00000121290 288 ntBASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm45195-201ENSMUST00000205597 1008 ntBASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm42690-201ENSMUST00000197921 1836 ntBASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trav6n-6A0A075B6B2 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm28631-201ENSMUST00000190740 334 ntBASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm44855-201ENSMUST00000205725 362 ntBASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm5626-201ENSMUST00000222151 1058 ntBASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 AC154687.2-201ENSMUST00000223853 640 ntBASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm40377-201ENSMUST00000204604 2015 ntBASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trav6n-6A0A075B6B2 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Trav6n-6A0A075B6B2 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms