Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav18A0A075B656 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav18A0A075B656 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Trav18A0A075B656 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav18A0A075B656 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav18A0A075B656 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav18A0A075B656 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav18A0A075B656 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
Trav18A0A075B656 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav18A0A075B656 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav18A0A075B656 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav18A0A075B656 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav18A0A075B656 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav18A0A075B656 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav18A0A075B656 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav18A0A075B656 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Trav18A0A075B656 Gm12539-201ENSMUST00000121549 1098 ntBASIC10.47□□□□□ -0.73
Trav18A0A075B656 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav18A0A075B656 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC10.47□□□□□ -0.73
Trav18A0A075B656 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC10.47□□□□□ -0.73
Trav18A0A075B656 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav18A0A075B656 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav18A0A075B656 Gm28693-202ENSMUST00000190758 331 ntBASIC10.47□□□□□ -0.73
Trav18A0A075B656 Gm2495-201ENSMUST00000191160 466 ntBASIC10.47□□□□□ -0.73
Trav18A0A075B656 AL593843.1-201ENSMUST00000195891 145 ntBASIC10.47□□□□□ -0.73
Trav18A0A075B656 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC10.47□□□□□ -0.73
Trav18A0A075B656 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trav18A0A075B656 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC10.47□□□□□ -0.73
Trav18A0A075B656 Gm18916-201ENSMUST00000198264 1246 ntBASIC10.47□□□□□ -0.73
Trav18A0A075B656 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC10.47□□□□□ -0.73
Trav18A0A075B656 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav18A0A075B656 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav18A0A075B656 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav18A0A075B656 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav18A0A075B656 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav18A0A075B656 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Trav18A0A075B656 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav18A0A075B656 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav18A0A075B656 Gm38376-201ENSMUST00000195493 2253 ntBASIC10.47□□□□□ -0.73
Trav18A0A075B656 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav18A0A075B656 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.47□□□□□ -0.73
Trav18A0A075B656 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.47□□□□□ -0.73
Trav18A0A075B656 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav18A0A075B656 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav18A0A075B656 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC10.47□□□□□ -0.73
Trav18A0A075B656 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC10.47□□□□□ -0.73
Trav18A0A075B656 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav18A0A075B656 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC10.47□□□□□ -0.73
Trav18A0A075B656 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trav18A0A075B656 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav18A0A075B656 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav18A0A075B656 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav18A0A075B656 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav18A0A075B656 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Trav18A0A075B656 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.73
Trav18A0A075B656 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav18A0A075B656 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav18A0A075B656 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav18A0A075B656 Gm7488-201ENSMUST00000117148 684 ntBASIC10.46□□□□□ -0.73
Trav18A0A075B656 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC10.46□□□□□ -0.73
Trav18A0A075B656 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
Trav18A0A075B656 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC10.46□□□□□ -0.73
Trav18A0A075B656 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trav18A0A075B656 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC10.46□□□□□ -0.73
Trav18A0A075B656 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC10.46□□□□□ -0.73
Trav18A0A075B656 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC10.46□□□□□ -0.73
Trav18A0A075B656 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC10.46□□□□□ -0.73
Trav18A0A075B656 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trav18A0A075B656 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC10.46□□□□□ -0.74
Trav18A0A075B656 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav18A0A075B656 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav18A0A075B656 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav18A0A075B656 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav18A0A075B656 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav18A0A075B656 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.74
Trav18A0A075B656 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav18A0A075B656 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav18A0A075B656 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav18A0A075B656 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav18A0A075B656 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.46□□□□□ -0.74
Trav18A0A075B656 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav18A0A075B656 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav18A0A075B656 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav18A0A075B656 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav18A0A075B656 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav18A0A075B656 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
Trav18A0A075B656 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav18A0A075B656 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav18A0A075B656 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC10.46□□□□□ -0.74
Trav18A0A075B656 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav18A0A075B656 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav18A0A075B656 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trav18A0A075B656 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trav18A0A075B656 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav18A0A075B656 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav18A0A075B656 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav18A0A075B656 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav18A0A075B656 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav18A0A075B656 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav18A0A075B656 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms