Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Gm1335-201ENSMUST00000121653 386 ntBASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Gm2991-201ENSMUST00000173338 480 ntBASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Gm20281-201ENSMUST00000188225 267 ntBASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Gm6290-201ENSMUST00000207666 1158 ntBASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Gm5178-201ENSMUST00000219380 898 ntBASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Gm18881-201ENSMUST00000220450 1545 ntBASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Lhx6Q9R1R0 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 5830473C10Rik-202ENSMUST00000200765 1691 ntTSL 5 BASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 Plgrkt-208ENSMUST00000143467 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 Mir5120-201ENSMUST00000175020 78 ntBASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 Gm38158-201ENSMUST00000194617 339 ntBASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 Gm42454-201ENSMUST00000196805 1181 ntBASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 Gm43136-201ENSMUST00000200403 636 ntBASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 Gm45733-201ENSMUST00000212988 437 ntBASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 Gm19208-201ENSMUST00000213861 912 ntBASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 CT025579.2-201ENSMUST00000225280 816 ntBASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 Rida-201ENSMUST00000022946 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lhx6Q9R1R0 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms