Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.3□□□□□ -0.44
Ube4bQ9ES00 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube4bQ9ES00 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ube4bQ9ES00 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.3□□□□□ -0.44
Ube4bQ9ES00 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ube4bQ9ES00 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ube4bQ9ES00 Gm16476-201ENSMUST00000221544 139 ntBASIC12.3□□□□□ -0.44
Ube4bQ9ES00 Dupd1-202ENSMUST00000224735 548 ntBASIC12.3□□□□□ -0.44
Ube4bQ9ES00 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube4bQ9ES00 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube4bQ9ES00 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ube4bQ9ES00 Mir497b-201ENSMUST00000093601 125 ntBASIC12.3□□□□□ -0.44
Ube4bQ9ES00 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ube4bQ9ES00 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube4bQ9ES00 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube4bQ9ES00 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube4bQ9ES00 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ube4bQ9ES00 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ube4bQ9ES00 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ube4bQ9ES00 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.3□□□□□ -0.44
Ube4bQ9ES00 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube4bQ9ES00 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ube4bQ9ES00 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.3□□□□□ -0.44
Ube4bQ9ES00 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ube4bQ9ES00 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ube4bQ9ES00 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ube4bQ9ES00 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ube4bQ9ES00 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ube4bQ9ES00 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.29□□□□□ -0.44
Ube4bQ9ES00 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ube4bQ9ES00 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ube4bQ9ES00 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ube4bQ9ES00 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ube4bQ9ES00 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ube4bQ9ES00 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ube4bQ9ES00 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ube4bQ9ES00 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ube4bQ9ES00 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ube4bQ9ES00 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ube4bQ9ES00 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ube4bQ9ES00 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ube4bQ9ES00 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ube4bQ9ES00 Gm24543-201ENSMUST00000103867 82 ntBASIC12.29□□□□□ -0.44
Ube4bQ9ES00 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ube4bQ9ES00 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ube4bQ9ES00 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.29□□□□□ -0.44
Ube4bQ9ES00 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Ube4bQ9ES00 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.29□□□□□ -0.44
Ube4bQ9ES00 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.29□□□□□ -0.44
Ube4bQ9ES00 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.29□□□□□ -0.44
Ube4bQ9ES00 Gm5779-201ENSMUST00000218467 910 ntBASIC12.29□□□□□ -0.44
Ube4bQ9ES00 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.29□□□□□ -0.44
Ube4bQ9ES00 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Ube4bQ9ES00 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ube4bQ9ES00 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.29□□□□□ -0.44
Ube4bQ9ES00 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ube4bQ9ES00 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.29□□□□□ -0.44
Ube4bQ9ES00 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.29□□□□□ -0.44
Ube4bQ9ES00 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ube4bQ9ES00 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ube4bQ9ES00 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ube4bQ9ES00 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.29□□□□□ -0.44
Ube4bQ9ES00 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ube4bQ9ES00 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ube4bQ9ES00 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ube4bQ9ES00 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ube4bQ9ES00 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ube4bQ9ES00 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Ube4bQ9ES00 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ube4bQ9ES00 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ube4bQ9ES00 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ube4bQ9ES00 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.29□□□□□ -0.44
Ube4bQ9ES00 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ube4bQ9ES00 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ube4bQ9ES00 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ube4bQ9ES00 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ube4bQ9ES00 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ube4bQ9ES00 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.28□□□□□ -0.44
Ube4bQ9ES00 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ube4bQ9ES00 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ube4bQ9ES00 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ube4bQ9ES00 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.28□□□□□ -0.44
Ube4bQ9ES00 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ube4bQ9ES00 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ube4bQ9ES00 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ube4bQ9ES00 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.28□□□□□ -0.44
Ube4bQ9ES00 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ube4bQ9ES00 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ube4bQ9ES00 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ube4bQ9ES00 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ube4bQ9ES00 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ube4bQ9ES00 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ube4bQ9ES00 Gm6415-201ENSMUST00000118488 348 ntBASIC12.28□□□□□ -0.44
Ube4bQ9ES00 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ube4bQ9ES00 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.28□□□□□ -0.44
Ube4bQ9ES00 Gm26308-201ENSMUST00000157768 69 ntBASIC12.28□□□□□ -0.44
Ube4bQ9ES00 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ube4bQ9ES00 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ube4bQ9ES00 Gm37714-201ENSMUST00000194742 342 ntBASIC12.28□□□□□ -0.44
Ube4bQ9ES00 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms