Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdc40Q9DC48 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdc40Q9DC48 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Cdc40Q9DC48 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Cdc40Q9DC48 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Cdc40Q9DC48 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdc40Q9DC48 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdc40Q9DC48 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdc40Q9DC48 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdc40Q9DC48 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdc40Q9DC48 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdc40Q9DC48 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdc40Q9DC48 Gm23931-201ENSMUST00000103842 109 ntBASIC11.92□□□□□ -0.5
Cdc40Q9DC48 Gm16202-201ENSMUST00000117532 544 ntBASIC11.92□□□□□ -0.5
Cdc40Q9DC48 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.92□□□□□ -0.5
Cdc40Q9DC48 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cdc40Q9DC48 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.92□□□□□ -0.5
Cdc40Q9DC48 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.92□□□□□ -0.5
Cdc40Q9DC48 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.92□□□□□ -0.5
Cdc40Q9DC48 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.92□□□□□ -0.5
Cdc40Q9DC48 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.92□□□□□ -0.5
Cdc40Q9DC48 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdc40Q9DC48 Rassf8-202ENSMUST00000058538 1131 ntBASIC11.92□□□□□ -0.5
Cdc40Q9DC48 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.92□□□□□ -0.5
Cdc40Q9DC48 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdc40Q9DC48 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdc40Q9DC48 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdc40Q9DC48 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Cdc40Q9DC48 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Cdc40Q9DC48 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Cdc40Q9DC48 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Cdc40Q9DC48 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdc40Q9DC48 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdc40Q9DC48 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Cdc40Q9DC48 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdc40Q9DC48 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdc40Q9DC48 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Cdc40Q9DC48 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Cdc40Q9DC48 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdc40Q9DC48 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Cdc40Q9DC48 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cdc40Q9DC48 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.91□□□□□ -0.5
Cdc40Q9DC48 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Cdc40Q9DC48 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdc40Q9DC48 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdc40Q9DC48 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdc40Q9DC48 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.91□□□□□ -0.5
Cdc40Q9DC48 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdc40Q9DC48 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Cdc40Q9DC48 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdc40Q9DC48 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdc40Q9DC48 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdc40Q9DC48 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Cdc40Q9DC48 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Cdc40Q9DC48 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Cdc40Q9DC48 Gm14350-201ENSMUST00000116642 640 ntBASIC11.91□□□□□ -0.5
Cdc40Q9DC48 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.91□□□□□ -0.5
Cdc40Q9DC48 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdc40Q9DC48 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdc40Q9DC48 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdc40Q9DC48 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Cdc40Q9DC48 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Cdc40Q9DC48 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdc40Q9DC48 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Cdc40Q9DC48 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.91□□□□□ -0.5
Cdc40Q9DC48 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdc40Q9DC48 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.91□□□□□ -0.5
Cdc40Q9DC48 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdc40Q9DC48 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdc40Q9DC48 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdc40Q9DC48 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdc40Q9DC48 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdc40Q9DC48 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cdc40Q9DC48 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdc40Q9DC48 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdc40Q9DC48 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdc40Q9DC48 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdc40Q9DC48 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdc40Q9DC48 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdc40Q9DC48 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cdc40Q9DC48 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.91□□□□□ -0.5
Cdc40Q9DC48 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdc40Q9DC48 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdc40Q9DC48 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdc40Q9DC48 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Cdc40Q9DC48 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdc40Q9DC48 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdc40Q9DC48 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Cdc40Q9DC48 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Cdc40Q9DC48 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdc40Q9DC48 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.9□□□□□ -0.5
Cdc40Q9DC48 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.9□□□□□ -0.5
Cdc40Q9DC48 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Cdc40Q9DC48 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.9□□□□□ -0.5
Cdc40Q9DC48 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.9□□□□□ -0.5
Cdc40Q9DC48 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdc40Q9DC48 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Cdc40Q9DC48 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.9□□□□□ -0.5
Cdc40Q9DC48 Gm18054-201ENSMUST00000207539 555 ntBASIC11.9□□□□□ -0.5
Cdc40Q9DC48 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms