Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Gm6152-201ENSMUST00000151704 340 ntBASIC15.3■□□□□ 0.04
Chmp4cQ9D7F7 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Chmp4cQ9D7F7 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp4cQ9D7F7 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp4cQ9D7F7 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC15.3■□□□□ 0.04
Chmp4cQ9D7F7 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp4cQ9D7F7 Gm9908-201ENSMUST00000211534 448 ntBASIC15.3■□□□□ 0.04
Chmp4cQ9D7F7 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC15.3■□□□□ 0.04
Chmp4cQ9D7F7 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
Chmp4cQ9D7F7 AC093022.5-201ENSMUST00000226841 1079 ntBASIC15.3■□□□□ 0.04
Chmp4cQ9D7F7 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp4cQ9D7F7 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp4cQ9D7F7 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp4cQ9D7F7 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC15.3■□□□□ 0.04
Chmp4cQ9D7F7 Gm6180-201ENSMUST00000065243 498 ntBASIC15.3■□□□□ 0.04
Chmp4cQ9D7F7 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp4cQ9D7F7 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp4cQ9D7F7 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp4cQ9D7F7 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp4cQ9D7F7 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC15.3■□□□□ 0.04
Chmp4cQ9D7F7 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp4cQ9D7F7 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp4cQ9D7F7 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp4cQ9D7F7 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chmp4cQ9D7F7 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp4cQ9D7F7 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC15.29■□□□□ 0.04
Chmp4cQ9D7F7 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp4cQ9D7F7 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp4cQ9D7F7 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp4cQ9D7F7 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp4cQ9D7F7 Gm44241-201ENSMUST00000203230 1662 ntBASIC15.29■□□□□ 0.04
Chmp4cQ9D7F7 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp4cQ9D7F7 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC15.29■□□□□ 0.04
Chmp4cQ9D7F7 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp4cQ9D7F7 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp4cQ9D7F7 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp4cQ9D7F7 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp4cQ9D7F7 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp4cQ9D7F7 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp4cQ9D7F7 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC15.29■□□□□ 0.04
Chmp4cQ9D7F7 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC15.29■□□□□ 0.04
Chmp4cQ9D7F7 Gm11978-201ENSMUST00000122315 466 ntBASIC15.29■□□□□ 0.04
Chmp4cQ9D7F7 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC15.29■□□□□ 0.04
Chmp4cQ9D7F7 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC15.29■□□□□ 0.04
Chmp4cQ9D7F7 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC15.29■□□□□ 0.04
Chmp4cQ9D7F7 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC15.29■□□□□ 0.04
Chmp4cQ9D7F7 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp4cQ9D7F7 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp4cQ9D7F7 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp4cQ9D7F7 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp4cQ9D7F7 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp4cQ9D7F7 Gm44758-201ENSMUST00000206096 2068 ntBASIC15.29■□□□□ 0.04
Chmp4cQ9D7F7 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp4cQ9D7F7 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp4cQ9D7F7 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Chmp4cQ9D7F7 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp4cQ9D7F7 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp4cQ9D7F7 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Chmp4cQ9D7F7 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp4cQ9D7F7 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chmp4cQ9D7F7 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Chmp4cQ9D7F7 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp4cQ9D7F7 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp4cQ9D7F7 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
Chmp4cQ9D7F7 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp4cQ9D7F7 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC15.28■□□□□ 0.04
Chmp4cQ9D7F7 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC15.28■□□□□ 0.04
Chmp4cQ9D7F7 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp4cQ9D7F7 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Chmp4cQ9D7F7 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp4cQ9D7F7 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp4cQ9D7F7 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Chmp4cQ9D7F7 AC155252.1-201ENSMUST00000226462 1208 ntBASIC15.28■□□□□ 0.04
Chmp4cQ9D7F7 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp4cQ9D7F7 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp4cQ9D7F7 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp4cQ9D7F7 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp4cQ9D7F7 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Chmp4cQ9D7F7 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp4cQ9D7F7 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp4cQ9D7F7 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC15.28■□□□□ 0.04
Chmp4cQ9D7F7 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Chmp4cQ9D7F7 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chmp4cQ9D7F7 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp4cQ9D7F7 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp4cQ9D7F7 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp4cQ9D7F7 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC15.27■□□□□ 0.04
Chmp4cQ9D7F7 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp4cQ9D7F7 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp4cQ9D7F7 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp4cQ9D7F7 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Chmp4cQ9D7F7 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp4cQ9D7F7 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp4cQ9D7F7 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp4cQ9D7F7 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC15.27■□□□□ 0.04
Chmp4cQ9D7F7 Gm5687-201ENSMUST00000118252 640 ntBASIC15.27■□□□□ 0.04
Chmp4cQ9D7F7 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC15.27■□□□□ 0.04
Chmp4cQ9D7F7 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chmp4cQ9D7F7 Gm28911-201ENSMUST00000188837 117 ntBASIC15.27■□□□□ 0.04
Chmp4cQ9D7F7 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms