Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3a3Q9D554 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3a3Q9D554 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Sf3a3Q9D554 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3a3Q9D554 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Sf3a3Q9D554 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Sf3a3Q9D554 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3a3Q9D554 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3a3Q9D554 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3a3Q9D554 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Sf3a3Q9D554 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Sf3a3Q9D554 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3a3Q9D554 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3a3Q9D554 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.94□□□□□ -0.34
Sf3a3Q9D554 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3a3Q9D554 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.94□□□□□ -0.34
Sf3a3Q9D554 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sf3a3Q9D554 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Sf3a3Q9D554 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3a3Q9D554 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3a3Q9D554 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3a3Q9D554 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Sf3a3Q9D554 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3a3Q9D554 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3a3Q9D554 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3a3Q9D554 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3a3Q9D554 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Sf3a3Q9D554 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3a3Q9D554 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.93□□□□□ -0.34
Sf3a3Q9D554 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.93□□□□□ -0.34
Sf3a3Q9D554 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3a3Q9D554 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3a3Q9D554 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3a3Q9D554 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Sf3a3Q9D554 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3a3Q9D554 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.93□□□□□ -0.34
Sf3a3Q9D554 Shd-206ENSMUST00000225145 998 ntBASIC12.93□□□□□ -0.34
Sf3a3Q9D554 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3a3Q9D554 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3a3Q9D554 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3a3Q9D554 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3a3Q9D554 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.93□□□□□ -0.34
Sf3a3Q9D554 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3a3Q9D554 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Sf3a3Q9D554 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3a3Q9D554 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3a3Q9D554 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Sf3a3Q9D554 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3a3Q9D554 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3a3Q9D554 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sf3a3Q9D554 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3a3Q9D554 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3a3Q9D554 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.92□□□□□ -0.34
Sf3a3Q9D554 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Sf3a3Q9D554 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3a3Q9D554 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.92□□□□□ -0.34
Sf3a3Q9D554 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3a3Q9D554 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3a3Q9D554 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3a3Q9D554 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.92□□□□□ -0.34
Sf3a3Q9D554 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3a3Q9D554 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3a3Q9D554 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Sf3a3Q9D554 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Sf3a3Q9D554 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Sf3a3Q9D554 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.92□□□□□ -0.34
Sf3a3Q9D554 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Sf3a3Q9D554 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Sf3a3Q9D554 Gm24420-201ENSMUST00000176676 59 ntBASIC12.92□□□□□ -0.34
Sf3a3Q9D554 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3a3Q9D554 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.92□□□□□ -0.34
Sf3a3Q9D554 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.92□□□□□ -0.34
Sf3a3Q9D554 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.92□□□□□ -0.34
Sf3a3Q9D554 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.92□□□□□ -0.34
Sf3a3Q9D554 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.92□□□□□ -0.34
Sf3a3Q9D554 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3a3Q9D554 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3a3Q9D554 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3a3Q9D554 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3a3Q9D554 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Sf3a3Q9D554 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Sf3a3Q9D554 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3a3Q9D554 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3a3Q9D554 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3a3Q9D554 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3a3Q9D554 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3a3Q9D554 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sf3a3Q9D554 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3a3Q9D554 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Sf3a3Q9D554 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3a3Q9D554 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3a3Q9D554 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Sf3a3Q9D554 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3a3Q9D554 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3a3Q9D554 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Sf3a3Q9D554 Gm15393-201ENSMUST00000120499 219 ntBASIC12.91□□□□□ -0.34
Sf3a3Q9D554 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3a3Q9D554 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3a3Q9D554 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sf3a3Q9D554 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms