Protein–RNA interactions for Protein: Q9CWY8

Rnaseh2a, Ribonuclease H2 subunit A, mousemouse

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnaseh2aQ9CWY8 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnaseh2aQ9CWY8 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnaseh2aQ9CWY8 Gm12623-201ENSMUST00000119849 1983 ntBASIC15.13■□□□□ 0.01
Rnaseh2aQ9CWY8 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnaseh2aQ9CWY8 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rnaseh2aQ9CWY8 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.13■□□□□ 0.01
Rnaseh2aQ9CWY8 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Rnaseh2aQ9CWY8 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnaseh2aQ9CWY8 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rnaseh2aQ9CWY8 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnaseh2aQ9CWY8 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnaseh2aQ9CWY8 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnaseh2aQ9CWY8 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnaseh2aQ9CWY8 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnaseh2aQ9CWY8 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Rnaseh2aQ9CWY8 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Rnaseh2aQ9CWY8 Gm11949-201ENSMUST00000117640 372 ntBASIC15.12■□□□□ 0.01
Rnaseh2aQ9CWY8 Gm12990-201ENSMUST00000120372 468 ntBASIC15.12■□□□□ 0.01
Rnaseh2aQ9CWY8 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC15.12■□□□□ 0.01
Rnaseh2aQ9CWY8 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rnaseh2aQ9CWY8 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rnaseh2aQ9CWY8 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Rnaseh2aQ9CWY8 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rnaseh2aQ9CWY8 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnaseh2aQ9CWY8 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC15.12■□□□□ 0.01
Rnaseh2aQ9CWY8 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC15.12■□□□□ 0.01
Rnaseh2aQ9CWY8 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnaseh2aQ9CWY8 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Rnaseh2aQ9CWY8 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnaseh2aQ9CWY8 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnaseh2aQ9CWY8 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnaseh2aQ9CWY8 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnaseh2aQ9CWY8 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnaseh2aQ9CWY8 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rnaseh2aQ9CWY8 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnaseh2aQ9CWY8 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rnaseh2aQ9CWY8 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnaseh2aQ9CWY8 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnaseh2aQ9CWY8 Gm9361-201ENSMUST00000198695 1507 ntBASIC15.12■□□□□ 0.01
Rnaseh2aQ9CWY8 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnaseh2aQ9CWY8 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rnaseh2aQ9CWY8 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.11■□□□□ 0.01
Rnaseh2aQ9CWY8 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.11■□□□□ 0.01
Rnaseh2aQ9CWY8 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rnaseh2aQ9CWY8 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnaseh2aQ9CWY8 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC15.11■□□□□ 0.01
Rnaseh2aQ9CWY8 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnaseh2aQ9CWY8 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnaseh2aQ9CWY8 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC15.11■□□□□ 0.01
Rnaseh2aQ9CWY8 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rnaseh2aQ9CWY8 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rnaseh2aQ9CWY8 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Rnaseh2aQ9CWY8 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnaseh2aQ9CWY8 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Rnaseh2aQ9CWY8 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rnaseh2aQ9CWY8 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC15.11■□□□□ 0.01
Rnaseh2aQ9CWY8 Gm15725-201ENSMUST00000119947 1090 ntBASIC15.11■□□□□ 0.01
Rnaseh2aQ9CWY8 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Rnaseh2aQ9CWY8 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC15.11■□□□□ 0.01
Rnaseh2aQ9CWY8 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnaseh2aQ9CWY8 Gm23045-201ENSMUST00000175041 96 ntBASIC15.11■□□□□ 0.01
Rnaseh2aQ9CWY8 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC15.11■□□□□ 0.01
Rnaseh2aQ9CWY8 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC15.11■□□□□ 0.01
Rnaseh2aQ9CWY8 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC15.11■□□□□ 0.01
Rnaseh2aQ9CWY8 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rnaseh2aQ9CWY8 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Rnaseh2aQ9CWY8 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Rnaseh2aQ9CWY8 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC15.11■□□□□ 0.01
Rnaseh2aQ9CWY8 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnaseh2aQ9CWY8 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnaseh2aQ9CWY8 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnaseh2aQ9CWY8 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnaseh2aQ9CWY8 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rnaseh2aQ9CWY8 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnaseh2aQ9CWY8 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Rnaseh2aQ9CWY8 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rnaseh2aQ9CWY8 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Rnaseh2aQ9CWY8 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnaseh2aQ9CWY8 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Rnaseh2aQ9CWY8 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Rnaseh2aQ9CWY8 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Rnaseh2aQ9CWY8 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnaseh2aQ9CWY8 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rnaseh2aQ9CWY8 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Rnaseh2aQ9CWY8 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.1■□□□□ 0.01
Rnaseh2aQ9CWY8 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rnaseh2aQ9CWY8 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnaseh2aQ9CWY8 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnaseh2aQ9CWY8 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnaseh2aQ9CWY8 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rnaseh2aQ9CWY8 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnaseh2aQ9CWY8 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rnaseh2aQ9CWY8 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnaseh2aQ9CWY8 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rnaseh2aQ9CWY8 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rnaseh2aQ9CWY8 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC15.1■□□□□ 0.01
Rnaseh2aQ9CWY8 Gm12943-201ENSMUST00000119616 210 ntBASIC15.1■□□□□ 0.01
Rnaseh2aQ9CWY8 Gm5909-201ENSMUST00000119768 1281 ntBASIC15.1■□□□□ 0.01
Rnaseh2aQ9CWY8 Cd63-ps-202ENSMUST00000154992 717 ntBASIC15.1■□□□□ 0.01
Rnaseh2aQ9CWY8 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms