Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.54□□□□□ -0.4
Trim16Q99PP9 Gm38671-201ENSMUST00000200573 130 ntBASIC12.54□□□□□ -0.4
Trim16Q99PP9 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.54□□□□□ -0.4
Trim16Q99PP9 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim16Q99PP9 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim16Q99PP9 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim16Q99PP9 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim16Q99PP9 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim16Q99PP9 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.54□□□□□ -0.4
Trim16Q99PP9 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim16Q99PP9 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim16Q99PP9 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trim16Q99PP9 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Trim16Q99PP9 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim16Q99PP9 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim16Q99PP9 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim16Q99PP9 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim16Q99PP9 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim16Q99PP9 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim16Q99PP9 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim16Q99PP9 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim16Q99PP9 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Trim16Q99PP9 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.53□□□□□ -0.4
Trim16Q99PP9 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim16Q99PP9 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim16Q99PP9 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim16Q99PP9 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trim16Q99PP9 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim16Q99PP9 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim16Q99PP9 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim16Q99PP9 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim16Q99PP9 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.53□□□□□ -0.4
Trim16Q99PP9 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim16Q99PP9 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim16Q99PP9 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim16Q99PP9 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.53□□□□□ -0.4
Trim16Q99PP9 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim16Q99PP9 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trim16Q99PP9 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.53□□□□□ -0.4
Trim16Q99PP9 Gm17794-201ENSMUST00000220252 955 ntBASIC12.53□□□□□ -0.4
Trim16Q99PP9 Gm8598-201ENSMUST00000221184 836 ntBASIC12.53□□□□□ -0.4
Trim16Q99PP9 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trim16Q99PP9 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim16Q99PP9 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim16Q99PP9 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim16Q99PP9 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim16Q99PP9 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim16Q99PP9 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim16Q99PP9 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.53□□□□□ -0.4
Trim16Q99PP9 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim16Q99PP9 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim16Q99PP9 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.53□□□□□ -0.4
Trim16Q99PP9 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim16Q99PP9 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.53□□□□□ -0.4
Trim16Q99PP9 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim16Q99PP9 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.53□□□□□ -0.4
Trim16Q99PP9 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.53□□□□□ -0.4
Trim16Q99PP9 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim16Q99PP9 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim16Q99PP9 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim16Q99PP9 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trim16Q99PP9 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim16Q99PP9 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim16Q99PP9 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim16Q99PP9 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim16Q99PP9 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim16Q99PP9 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trim16Q99PP9 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trim16Q99PP9 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim16Q99PP9 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim16Q99PP9 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim16Q99PP9 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim16Q99PP9 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.52□□□□□ -0.41
Trim16Q99PP9 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim16Q99PP9 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim16Q99PP9 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim16Q99PP9 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.52□□□□□ -0.41
Trim16Q99PP9 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim16Q99PP9 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim16Q99PP9 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim16Q99PP9 Gm45841-201ENSMUST00000207700 164 ntBASIC12.52□□□□□ -0.41
Trim16Q99PP9 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.52□□□□□ -0.41
Trim16Q99PP9 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.52□□□□□ -0.41
Trim16Q99PP9 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim16Q99PP9 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim16Q99PP9 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim16Q99PP9 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim16Q99PP9 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim16Q99PP9 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim16Q99PP9 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim16Q99PP9 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim16Q99PP9 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim16Q99PP9 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim16Q99PP9 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.52□□□□□ -0.41
Trim16Q99PP9 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim16Q99PP9 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trim16Q99PP9 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.41
Trim16Q99PP9 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trim16Q99PP9 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trim16Q99PP9 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms