Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cdk5rap3Q99LM2 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cdk5rap3Q99LM2 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.27□□□□□ -0.29
Cdk5rap3Q99LM2 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk5rap3Q99LM2 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk5rap3Q99LM2 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk5rap3Q99LM2 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Cdk5rap3Q99LM2 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk5rap3Q99LM2 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk5rap3Q99LM2 Gm12859-201ENSMUST00000117834 427 ntBASIC13.26□□□□□ -0.29
Cdk5rap3Q99LM2 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Cdk5rap3Q99LM2 Gm12291-201ENSMUST00000121627 311 ntBASIC13.26□□□□□ -0.29
Cdk5rap3Q99LM2 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.26□□□□□ -0.29
Cdk5rap3Q99LM2 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk5rap3Q99LM2 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.26□□□□□ -0.29
Cdk5rap3Q99LM2 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.26□□□□□ -0.29
Cdk5rap3Q99LM2 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Cdk5rap3Q99LM2 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Cdk5rap3Q99LM2 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk5rap3Q99LM2 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk5rap3Q99LM2 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk5rap3Q99LM2 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk5rap3Q99LM2 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk5rap3Q99LM2 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk5rap3Q99LM2 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk5rap3Q99LM2 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk5rap3Q99LM2 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk5rap3Q99LM2 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Cdk5rap3Q99LM2 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk5rap3Q99LM2 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk5rap3Q99LM2 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk5rap3Q99LM2 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Cdk5rap3Q99LM2 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cdk5rap3Q99LM2 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap3Q99LM2 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.25□□□□□ -0.29
Cdk5rap3Q99LM2 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap3Q99LM2 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap3Q99LM2 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.25□□□□□ -0.29
Cdk5rap3Q99LM2 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap3Q99LM2 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap3Q99LM2 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap3Q99LM2 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap3Q99LM2 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap3Q99LM2 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap3Q99LM2 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap3Q99LM2 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.25□□□□□ -0.29
Cdk5rap3Q99LM2 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap3Q99LM2 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.25□□□□□ -0.29
Cdk5rap3Q99LM2 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.25□□□□□ -0.29
Cdk5rap3Q99LM2 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap3Q99LM2 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap3Q99LM2 Gm2495-201ENSMUST00000191160 466 ntBASIC13.25□□□□□ -0.29
Cdk5rap3Q99LM2 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap3Q99LM2 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.25□□□□□ -0.29
Cdk5rap3Q99LM2 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.25□□□□□ -0.29
Cdk5rap3Q99LM2 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap3Q99LM2 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap3Q99LM2 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap3Q99LM2 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap3Q99LM2 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap3Q99LM2 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap3Q99LM2 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap3Q99LM2 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap3Q99LM2 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap3Q99LM2 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap3Q99LM2 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap3Q99LM2 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap3Q99LM2 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Cdk5rap3Q99LM2 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cdk5rap3Q99LM2 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk5rap3Q99LM2 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Cdk5rap3Q99LM2 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk5rap3Q99LM2 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk5rap3Q99LM2 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Cdk5rap3Q99LM2 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Cdk5rap3Q99LM2 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk5rap3Q99LM2 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk5rap3Q99LM2 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.24□□□□□ -0.29
Cdk5rap3Q99LM2 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk5rap3Q99LM2 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.24□□□□□ -0.29
Cdk5rap3Q99LM2 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk5rap3Q99LM2 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk5rap3Q99LM2 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk5rap3Q99LM2 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Cdk5rap3Q99LM2 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk5rap3Q99LM2 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.24□□□□□ -0.29
Cdk5rap3Q99LM2 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.24□□□□□ -0.29
Cdk5rap3Q99LM2 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk5rap3Q99LM2 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.24□□□□□ -0.29
Cdk5rap3Q99LM2 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.24□□□□□ -0.29
Cdk5rap3Q99LM2 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.24□□□□□ -0.29
Cdk5rap3Q99LM2 Gm15823-201ENSMUST00000064305 670 ntBASIC13.24□□□□□ -0.29
Cdk5rap3Q99LM2 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Cdk5rap3Q99LM2 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk5rap3Q99LM2 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk5rap3Q99LM2 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk5rap3Q99LM2 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Cdk5rap3Q99LM2 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.24□□□□□ -0.29
Cdk5rap3Q99LM2 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.24□□□□□ -0.29
Cdk5rap3Q99LM2 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms