Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.42□□□□□ -0.58
Thumpd1Q99J36 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC11.42□□□□□ -0.58
Thumpd1Q99J36 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Thumpd1Q99J36 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thumpd1Q99J36 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thumpd1Q99J36 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thumpd1Q99J36 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thumpd1Q99J36 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thumpd1Q99J36 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Thumpd1Q99J36 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Thumpd1Q99J36 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Thumpd1Q99J36 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Thumpd1Q99J36 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.41□□□□□ -0.58
Thumpd1Q99J36 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC11.41□□□□□ -0.58
Thumpd1Q99J36 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thumpd1Q99J36 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thumpd1Q99J36 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Thumpd1Q99J36 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thumpd1Q99J36 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thumpd1Q99J36 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Thumpd1Q99J36 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Thumpd1Q99J36 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thumpd1Q99J36 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Thumpd1Q99J36 Gm12291-201ENSMUST00000121627 311 ntBASIC11.41□□□□□ -0.58
Thumpd1Q99J36 Gm7063-201ENSMUST00000186840 981 ntBASIC11.41□□□□□ -0.58
Thumpd1Q99J36 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Thumpd1Q99J36 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.41□□□□□ -0.58
Thumpd1Q99J36 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.41□□□□□ -0.58
Thumpd1Q99J36 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thumpd1Q99J36 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Thumpd1Q99J36 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thumpd1Q99J36 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Thumpd1Q99J36 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thumpd1Q99J36 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Thumpd1Q99J36 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thumpd1Q99J36 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Thumpd1Q99J36 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thumpd1Q99J36 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thumpd1Q99J36 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thumpd1Q99J36 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thumpd1Q99J36 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thumpd1Q99J36 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.41□□□□□ -0.58
Thumpd1Q99J36 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Thumpd1Q99J36 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Thumpd1Q99J36 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.41□□□□□ -0.58
Thumpd1Q99J36 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Thumpd1Q99J36 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Thumpd1Q99J36 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Thumpd1Q99J36 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Thumpd1Q99J36 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Thumpd1Q99J36 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Thumpd1Q99J36 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Thumpd1Q99J36 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Thumpd1Q99J36 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Thumpd1Q99J36 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Thumpd1Q99J36 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Thumpd1Q99J36 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.4□□□□□ -0.58
Thumpd1Q99J36 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Thumpd1Q99J36 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Thumpd1Q99J36 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC11.4□□□□□ -0.58
Thumpd1Q99J36 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Thumpd1Q99J36 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.4□□□□□ -0.58
Thumpd1Q99J36 Gm11594-201ENSMUST00000122313 162 ntBASIC11.4□□□□□ -0.58
Thumpd1Q99J36 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.4□□□□□ -0.58
Thumpd1Q99J36 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Thumpd1Q99J36 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Thumpd1Q99J36 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.4□□□□□ -0.58
Thumpd1Q99J36 Gm43514-201ENSMUST00000198852 424 ntBASIC11.4□□□□□ -0.58
Thumpd1Q99J36 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.4□□□□□ -0.58
Thumpd1Q99J36 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Thumpd1Q99J36 AC126408.1-201ENSMUST00000225184 523 ntBASIC11.4□□□□□ -0.58
Thumpd1Q99J36 Gm20445-201ENSMUST00000061905 565 ntBASIC11.4□□□□□ -0.58
Thumpd1Q99J36 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Thumpd1Q99J36 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Thumpd1Q99J36 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Thumpd1Q99J36 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Thumpd1Q99J36 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Thumpd1Q99J36 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Thumpd1Q99J36 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Thumpd1Q99J36 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Thumpd1Q99J36 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Thumpd1Q99J36 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms