Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Pcdhac1Q91Y10 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Pcdhac1Q91Y10 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12□□□□□ -0.49
Pcdhac1Q91Y10 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhac1Q91Y10 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pcdhac1Q91Y10 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12□□□□□ -0.49
Pcdhac1Q91Y10 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12□□□□□ -0.49
Pcdhac1Q91Y10 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhac1Q91Y10 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Pcdhac1Q91Y10 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhac1Q91Y10 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhac1Q91Y10 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Pcdhac1Q91Y10 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhac1Q91Y10 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhac1Q91Y10 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.99□□□□□ -0.49
Pcdhac1Q91Y10 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdhac1Q91Y10 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhac1Q91Y10 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhac1Q91Y10 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.99□□□□□ -0.49
Pcdhac1Q91Y10 Gm12490-201ENSMUST00000120255 560 ntBASIC11.99□□□□□ -0.49
Pcdhac1Q91Y10 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhac1Q91Y10 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhac1Q91Y10 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.99□□□□□ -0.49
Pcdhac1Q91Y10 Gm45384-201ENSMUST00000210451 277 ntBASIC11.99□□□□□ -0.49
Pcdhac1Q91Y10 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.99□□□□□ -0.49
Pcdhac1Q91Y10 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhac1Q91Y10 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhac1Q91Y10 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Pcdhac1Q91Y10 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.99□□□□□ -0.49
Pcdhac1Q91Y10 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.99□□□□□ -0.49
Pcdhac1Q91Y10 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhac1Q91Y10 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Pcdhac1Q91Y10 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.99□□□□□ -0.49
Pcdhac1Q91Y10 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhac1Q91Y10 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhac1Q91Y10 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Pcdhac1Q91Y10 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhac1Q91Y10 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhac1Q91Y10 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhac1Q91Y10 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhac1Q91Y10 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhac1Q91Y10 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Pcdhac1Q91Y10 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pcdhac1Q91Y10 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhac1Q91Y10 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhac1Q91Y10 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Pcdhac1Q91Y10 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhac1Q91Y10 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhac1Q91Y10 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdhac1Q91Y10 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhac1Q91Y10 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhac1Q91Y10 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhac1Q91Y10 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhac1Q91Y10 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.98□□□□□ -0.49
Pcdhac1Q91Y10 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhac1Q91Y10 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.98□□□□□ -0.49
Pcdhac1Q91Y10 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhac1Q91Y10 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhac1Q91Y10 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdhac1Q91Y10 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Pcdhac1Q91Y10 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Pcdhac1Q91Y10 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.98□□□□□ -0.49
Pcdhac1Q91Y10 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdhac1Q91Y10 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Pcdhac1Q91Y10 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhac1Q91Y10 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC11.98□□□□□ -0.49
Pcdhac1Q91Y10 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.98□□□□□ -0.49
Pcdhac1Q91Y10 AC159006.1-201ENSMUST00000226396 258 ntBASIC11.98□□□□□ -0.49
Pcdhac1Q91Y10 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhac1Q91Y10 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhac1Q91Y10 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhac1Q91Y10 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhac1Q91Y10 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Pcdhac1Q91Y10 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Pcdhac1Q91Y10 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhac1Q91Y10 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhac1Q91Y10 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhac1Q91Y10 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhac1Q91Y10 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.98□□□□□ -0.49
Pcdhac1Q91Y10 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pcdhac1Q91Y10 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Pcdhac1Q91Y10 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhac1Q91Y10 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.97□□□□□ -0.49
Pcdhac1Q91Y10 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhac1Q91Y10 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhac1Q91Y10 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhac1Q91Y10 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhac1Q91Y10 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhac1Q91Y10 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhac1Q91Y10 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhac1Q91Y10 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhac1Q91Y10 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhac1Q91Y10 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhac1Q91Y10 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Pcdhac1Q91Y10 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhac1Q91Y10 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhac1Q91Y10 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.97□□□□□ -0.49
Pcdhac1Q91Y10 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhac1Q91Y10 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Pcdhac1Q91Y10 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms