Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC15.05■□□□□ 0
Pcdhb5Q91XZ5 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Pcdhb5Q91XZ5 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb5Q91XZ5 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb5Q91XZ5 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb5Q91XZ5 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb5Q91XZ5 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Pcdhb5Q91XZ5 Gm12217-201ENSMUST00000118858 696 ntBASIC15.05■□□□□ -0
Pcdhb5Q91XZ5 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb5Q91XZ5 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC15.05■□□□□ -0
Pcdhb5Q91XZ5 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb5Q91XZ5 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb5Q91XZ5 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC15.05■□□□□ -0
Pcdhb5Q91XZ5 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC15.05■□□□□ -0
Pcdhb5Q91XZ5 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC15.05■□□□□ -0
Pcdhb5Q91XZ5 Nsd1-205ENSMUST00000224693 852 ntBASIC15.05■□□□□ -0
Pcdhb5Q91XZ5 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb5Q91XZ5 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb5Q91XZ5 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC15.05■□□□□ -0
Pcdhb5Q91XZ5 Gm45495-201ENSMUST00000200940 1700 ntBASIC15.05■□□□□ -0
Pcdhb5Q91XZ5 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb5Q91XZ5 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC15.05■□□□□ -0
Pcdhb5Q91XZ5 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.05■□□□□ -0
Pcdhb5Q91XZ5 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb5Q91XZ5 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb5Q91XZ5 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb5Q91XZ5 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb5Q91XZ5 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb5Q91XZ5 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb5Q91XZ5 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Pcdhb5Q91XZ5 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb5Q91XZ5 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb5Q91XZ5 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC15.04■□□□□ -0
Pcdhb5Q91XZ5 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC15.04■□□□□ -0
Pcdhb5Q91XZ5 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb5Q91XZ5 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb5Q91XZ5 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb5Q91XZ5 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb5Q91XZ5 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb5Q91XZ5 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb5Q91XZ5 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb5Q91XZ5 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb5Q91XZ5 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb5Q91XZ5 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb5Q91XZ5 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC15.04■□□□□ -0
Pcdhb5Q91XZ5 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb5Q91XZ5 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb5Q91XZ5 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC15.04■□□□□ -0
Pcdhb5Q91XZ5 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC15.04■□□□□ -0
Pcdhb5Q91XZ5 Gm7857-201ENSMUST00000117957 358 ntBASIC15.04■□□□□ -0
Pcdhb5Q91XZ5 Gm5863-201ENSMUST00000121760 1008 ntBASIC15.04■□□□□ -0
Pcdhb5Q91XZ5 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC15.04■□□□□ -0
Pcdhb5Q91XZ5 B9d1os-201ENSMUST00000137010 674 ntBASIC15.04■□□□□ -0
Pcdhb5Q91XZ5 Mir6927-201ENSMUST00000184494 71 ntBASIC15.04■□□□□ -0
Pcdhb5Q91XZ5 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC15.04■□□□□ -0
Pcdhb5Q91XZ5 AC166344.1-202ENSMUST00000224139 234 ntBASIC15.04■□□□□ -0
Pcdhb5Q91XZ5 Gzmn-202ENSMUST00000225535 989 ntBASIC15.04■□□□□ -0
Pcdhb5Q91XZ5 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Pcdhb5Q91XZ5 Gm8385-201ENSMUST00000058999 643 ntBASIC15.04■□□□□ -0
Pcdhb5Q91XZ5 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Pcdhb5Q91XZ5 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb5Q91XZ5 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb5Q91XZ5 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb5Q91XZ5 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Pcdhb5Q91XZ5 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb5Q91XZ5 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb5Q91XZ5 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Pcdhb5Q91XZ5 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Pcdhb5Q91XZ5 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Pcdhb5Q91XZ5 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb5Q91XZ5 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb5Q91XZ5 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC15.04■□□□□ -0
Pcdhb5Q91XZ5 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Pcdhb5Q91XZ5 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb5Q91XZ5 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb5Q91XZ5 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Pcdhb5Q91XZ5 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb5Q91XZ5 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC15.03■□□□□ -0
Pcdhb5Q91XZ5 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb5Q91XZ5 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb5Q91XZ5 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb5Q91XZ5 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb5Q91XZ5 Gm13996-201ENSMUST00000118456 430 ntBASIC15.03■□□□□ -0
Pcdhb5Q91XZ5 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb5Q91XZ5 Gm24845-201ENSMUST00000158034 109 ntBASIC15.03■□□□□ -0
Pcdhb5Q91XZ5 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC15.03■□□□□ -0
Pcdhb5Q91XZ5 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Pcdhb5Q91XZ5 Mir6979-201ENSMUST00000183927 56 ntBASIC15.03■□□□□ -0
Pcdhb5Q91XZ5 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb5Q91XZ5 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC15.03■□□□□ -0
Pcdhb5Q91XZ5 Abhd11os-203ENSMUST00000222613 363 ntBASIC15.03■□□□□ -0
Pcdhb5Q91XZ5 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb5Q91XZ5 Gm10076-201ENSMUST00000073238 384 ntBASIC15.03■□□□□ -0
Pcdhb5Q91XZ5 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb5Q91XZ5 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb5Q91XZ5 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb5Q91XZ5 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Pcdhb5Q91XZ5 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC15.03■□□□□ -0
Pcdhb5Q91XZ5 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.03■□□□□ -0
Pcdhb5Q91XZ5 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms