Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb8Q91XZ2 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb8Q91XZ2 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb8Q91XZ2 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb8Q91XZ2 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb8Q91XZ2 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb8Q91XZ2 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb8Q91XZ2 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Pcdhb8Q91XZ2 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Pcdhb8Q91XZ2 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb8Q91XZ2 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb8Q91XZ2 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb8Q91XZ2 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb8Q91XZ2 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb8Q91XZ2 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.52□□□□□ -0.4
Pcdhb8Q91XZ2 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb8Q91XZ2 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb8Q91XZ2 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb8Q91XZ2 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb8Q91XZ2 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.52□□□□□ -0.4
Pcdhb8Q91XZ2 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Pcdhb8Q91XZ2 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb8Q91XZ2 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb8Q91XZ2 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb8Q91XZ2 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Pcdhb8Q91XZ2 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb8Q91XZ2 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb8Q91XZ2 Gm8805-201ENSMUST00000117848 313 ntBASIC12.52□□□□□ -0.41
Pcdhb8Q91XZ2 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.52□□□□□ -0.41
Pcdhb8Q91XZ2 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Pcdhb8Q91XZ2 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb8Q91XZ2 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Pcdhb8Q91XZ2 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.52□□□□□ -0.41
Pcdhb8Q91XZ2 Gm17794-201ENSMUST00000220252 955 ntBASIC12.52□□□□□ -0.41
Pcdhb8Q91XZ2 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.52□□□□□ -0.41
Pcdhb8Q91XZ2 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.52□□□□□ -0.41
Pcdhb8Q91XZ2 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb8Q91XZ2 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb8Q91XZ2 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.52□□□□□ -0.41
Pcdhb8Q91XZ2 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb8Q91XZ2 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.52□□□□□ -0.41
Pcdhb8Q91XZ2 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.52□□□□□ -0.41
Pcdhb8Q91XZ2 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb8Q91XZ2 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.52□□□□□ -0.41
Pcdhb8Q91XZ2 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb8Q91XZ2 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb8Q91XZ2 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb8Q91XZ2 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb8Q91XZ2 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Pcdhb8Q91XZ2 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb8Q91XZ2 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.52□□□□□ -0.41
Pcdhb8Q91XZ2 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb8Q91XZ2 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Pcdhb8Q91XZ2 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb8Q91XZ2 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdhb8Q91XZ2 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Pcdhb8Q91XZ2 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb8Q91XZ2 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb8Q91XZ2 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb8Q91XZ2 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.51□□□□□ -0.41
Pcdhb8Q91XZ2 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Pcdhb8Q91XZ2 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb8Q91XZ2 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb8Q91XZ2 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb8Q91XZ2 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb8Q91XZ2 Gm12490-201ENSMUST00000120255 560 ntBASIC12.51□□□□□ -0.41
Pcdhb8Q91XZ2 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdhb8Q91XZ2 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdhb8Q91XZ2 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb8Q91XZ2 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb8Q91XZ2 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdhb8Q91XZ2 Gm9002-201ENSMUST00000178437 499 ntBASIC12.51□□□□□ -0.41
Pcdhb8Q91XZ2 Gm27892-201ENSMUST00000185017 106 ntBASIC12.51□□□□□ -0.41
Pcdhb8Q91XZ2 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.51□□□□□ -0.41
Pcdhb8Q91XZ2 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb8Q91XZ2 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb8Q91XZ2 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb8Q91XZ2 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb8Q91XZ2 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb8Q91XZ2 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Pcdhb8Q91XZ2 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb8Q91XZ2 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb8Q91XZ2 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb8Q91XZ2 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb8Q91XZ2 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Pcdhb8Q91XZ2 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdhb8Q91XZ2 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.51□□□□□ -0.41
Pcdhb8Q91XZ2 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.51□□□□□ -0.41
Pcdhb8Q91XZ2 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
Pcdhb8Q91XZ2 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb8Q91XZ2 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Pcdhb8Q91XZ2 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb8Q91XZ2 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Pcdhb8Q91XZ2 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb8Q91XZ2 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.5□□□□□ -0.41
Pcdhb8Q91XZ2 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.5□□□□□ -0.41
Pcdhb8Q91XZ2 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb8Q91XZ2 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb8Q91XZ2 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb8Q91XZ2 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms