Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trex1Q91XB0 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trex1Q91XB0 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trex1Q91XB0 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.63□□□□□ -0.07
Trex1Q91XB0 B9d1os-201ENSMUST00000137010 674 ntBASIC14.63□□□□□ -0.07
Trex1Q91XB0 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trex1Q91XB0 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.63□□□□□ -0.07
Trex1Q91XB0 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
Trex1Q91XB0 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC14.63□□□□□ -0.07
Trex1Q91XB0 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trex1Q91XB0 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trex1Q91XB0 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC14.63□□□□□ -0.07
Trex1Q91XB0 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC14.63□□□□□ -0.07
Trex1Q91XB0 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC14.63□□□□□ -0.07
Trex1Q91XB0 AC166344.1-202ENSMUST00000224139 234 ntBASIC14.63□□□□□ -0.07
Trex1Q91XB0 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.63□□□□□ -0.07
Trex1Q91XB0 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trex1Q91XB0 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trex1Q91XB0 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trex1Q91XB0 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trex1Q91XB0 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trex1Q91XB0 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trex1Q91XB0 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trex1Q91XB0 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC14.63□□□□□ -0.07
Trex1Q91XB0 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trex1Q91XB0 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trex1Q91XB0 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trex1Q91XB0 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC14.63□□□□□ -0.07
Trex1Q91XB0 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trex1Q91XB0 Matn2-206ENSMUST00000228570 2798 ntBASIC14.62□□□□□ -0.07
Trex1Q91XB0 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.62□□□□□ -0.07
Trex1Q91XB0 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trex1Q91XB0 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trex1Q91XB0 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC14.62□□□□□ -0.07
Trex1Q91XB0 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trex1Q91XB0 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trex1Q91XB0 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trex1Q91XB0 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trex1Q91XB0 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Trex1Q91XB0 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trex1Q91XB0 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC14.62□□□□□ -0.07
Trex1Q91XB0 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trex1Q91XB0 Gm13996-201ENSMUST00000118456 430 ntBASIC14.62□□□□□ -0.07
Trex1Q91XB0 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trex1Q91XB0 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC14.62□□□□□ -0.07
Trex1Q91XB0 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trex1Q91XB0 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trex1Q91XB0 Mir6979-201ENSMUST00000183927 56 ntBASIC14.62□□□□□ -0.07
Trex1Q91XB0 Mir6927-201ENSMUST00000184494 71 ntBASIC14.62□□□□□ -0.07
Trex1Q91XB0 Gm28882-201ENSMUST00000185504 314 ntBASIC14.62□□□□□ -0.07
Trex1Q91XB0 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trex1Q91XB0 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC14.62□□□□□ -0.07
Trex1Q91XB0 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trex1Q91XB0 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trex1Q91XB0 Gm8385-201ENSMUST00000058999 643 ntBASIC14.62□□□□□ -0.07
Trex1Q91XB0 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trex1Q91XB0 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Trex1Q91XB0 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trex1Q91XB0 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trex1Q91XB0 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trex1Q91XB0 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trex1Q91XB0 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trex1Q91XB0 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trex1Q91XB0 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trex1Q91XB0 Gm9333-201ENSMUST00000205452 1323 ntBASIC14.62□□□□□ -0.07
Trex1Q91XB0 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trex1Q91XB0 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trex1Q91XB0 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trex1Q91XB0 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trex1Q91XB0 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trex1Q91XB0 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trex1Q91XB0 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trex1Q91XB0 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trex1Q91XB0 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trex1Q91XB0 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trex1Q91XB0 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trex1Q91XB0 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trex1Q91XB0 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Trex1Q91XB0 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trex1Q91XB0 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC14.61□□□□□ -0.07
Trex1Q91XB0 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC14.61□□□□□ -0.07
Trex1Q91XB0 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC14.61□□□□□ -0.07
Trex1Q91XB0 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC14.61□□□□□ -0.07
Trex1Q91XB0 Gm19208-201ENSMUST00000213861 912 ntBASIC14.61□□□□□ -0.07
Trex1Q91XB0 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC14.61□□□□□ -0.07
Trex1Q91XB0 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trex1Q91XB0 Gm10076-201ENSMUST00000073238 384 ntBASIC14.61□□□□□ -0.07
Trex1Q91XB0 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Trex1Q91XB0 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trex1Q91XB0 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trex1Q91XB0 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trex1Q91XB0 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trex1Q91XB0 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trex1Q91XB0 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trex1Q91XB0 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC14.61□□□□□ -0.07
Trex1Q91XB0 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trex1Q91XB0 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trex1Q91XB0 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trex1Q91XB0 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trex1Q91XB0 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms