Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx1Q91V10 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx1Q91V10 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx1Q91V10 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx1Q91V10 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx1Q91V10 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx1Q91V10 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Vsx1Q91V10 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx1Q91V10 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx1Q91V10 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Vsx1Q91V10 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.67□□□□□ -0.38
Vsx1Q91V10 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx1Q91V10 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.67□□□□□ -0.38
Vsx1Q91V10 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.67□□□□□ -0.38
Vsx1Q91V10 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Vsx1Q91V10 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx1Q91V10 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.67□□□□□ -0.38
Vsx1Q91V10 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.67□□□□□ -0.38
Vsx1Q91V10 Gm9211-201ENSMUST00000182882 975 ntBASIC12.67□□□□□ -0.38
Vsx1Q91V10 Gm44126-201ENSMUST00000204831 514 ntBASIC12.67□□□□□ -0.38
Vsx1Q91V10 Gm6458-201ENSMUST00000211573 635 ntBASIC12.67□□□□□ -0.38
Vsx1Q91V10 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Vsx1Q91V10 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx1Q91V10 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Vsx1Q91V10 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx1Q91V10 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx1Q91V10 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx1Q91V10 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx1Q91V10 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.67□□□□□ -0.38
Vsx1Q91V10 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx1Q91V10 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx1Q91V10 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Vsx1Q91V10 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx1Q91V10 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx1Q91V10 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.67□□□□□ -0.38
Vsx1Q91V10 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.67□□□□□ -0.38
Vsx1Q91V10 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx1Q91V10 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Vsx1Q91V10 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vsx1Q91V10 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Vsx1Q91V10 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vsx1Q91V10 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vsx1Q91V10 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vsx1Q91V10 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vsx1Q91V10 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vsx1Q91V10 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vsx1Q91V10 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vsx1Q91V10 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Vsx1Q91V10 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vsx1Q91V10 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vsx1Q91V10 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vsx1Q91V10 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vsx1Q91V10 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.66□□□□□ -0.38
Vsx1Q91V10 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vsx1Q91V10 Gm4993-201ENSMUST00000118719 1174 ntBASIC12.66□□□□□ -0.38
Vsx1Q91V10 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.66□□□□□ -0.38
Vsx1Q91V10 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.66□□□□□ -0.38
Vsx1Q91V10 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vsx1Q91V10 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC12.66□□□□□ -0.38
Vsx1Q91V10 Gm27552-201ENSMUST00000183351 62 ntBASIC12.66□□□□□ -0.38
Vsx1Q91V10 Gm27844-201ENSMUST00000183613 62 ntBASIC12.66□□□□□ -0.38
Vsx1Q91V10 Gm7003-201ENSMUST00000195089 312 ntBASIC12.66□□□□□ -0.38
Vsx1Q91V10 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vsx1Q91V10 Gm8712-201ENSMUST00000221090 701 ntBASIC12.66□□□□□ -0.38
Vsx1Q91V10 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.66□□□□□ -0.38
Vsx1Q91V10 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.66□□□□□ -0.38
Vsx1Q91V10 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Vsx1Q91V10 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vsx1Q91V10 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vsx1Q91V10 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vsx1Q91V10 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vsx1Q91V10 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vsx1Q91V10 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Vsx1Q91V10 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vsx1Q91V10 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Vsx1Q91V10 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vsx1Q91V10 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vsx1Q91V10 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vsx1Q91V10 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vsx1Q91V10 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vsx1Q91V10 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vsx1Q91V10 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vsx1Q91V10 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.66□□□□□ -0.38
Vsx1Q91V10 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.65□□□□□ -0.38
Vsx1Q91V10 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vsx1Q91V10 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
Vsx1Q91V10 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Vsx1Q91V10 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.65□□□□□ -0.38
Vsx1Q91V10 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Vsx1Q91V10 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Vsx1Q91V10 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.65□□□□□ -0.38
Vsx1Q91V10 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vsx1Q91V10 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vsx1Q91V10 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Vsx1Q91V10 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Vsx1Q91V10 Gm13996-201ENSMUST00000118456 430 ntBASIC12.65□□□□□ -0.38
Vsx1Q91V10 Gm11978-201ENSMUST00000122315 466 ntBASIC12.65□□□□□ -0.38
Vsx1Q91V10 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.65□□□□□ -0.38
Vsx1Q91V10 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC12.65□□□□□ -0.38
Vsx1Q91V10 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 108.5 ms