Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
H1fooQ8VIK3 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
H1fooQ8VIK3 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
H1fooQ8VIK3 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
H1fooQ8VIK3 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
H1fooQ8VIK3 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
H1fooQ8VIK3 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
H1fooQ8VIK3 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
H1fooQ8VIK3 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
H1fooQ8VIK3 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
H1fooQ8VIK3 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
H1fooQ8VIK3 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
H1fooQ8VIK3 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
H1fooQ8VIK3 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
H1fooQ8VIK3 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC10.73□□□□□ -0.69
H1fooQ8VIK3 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
H1fooQ8VIK3 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
H1fooQ8VIK3 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
H1fooQ8VIK3 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
H1fooQ8VIK3 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
H1fooQ8VIK3 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
H1fooQ8VIK3 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
H1fooQ8VIK3 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC10.73□□□□□ -0.69
H1fooQ8VIK3 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
H1fooQ8VIK3 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC10.73□□□□□ -0.69
H1fooQ8VIK3 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC10.73□□□□□ -0.69
H1fooQ8VIK3 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC10.73□□□□□ -0.69
H1fooQ8VIK3 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC10.73□□□□□ -0.69
H1fooQ8VIK3 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
H1fooQ8VIK3 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC10.73□□□□□ -0.69
H1fooQ8VIK3 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC10.73□□□□□ -0.69
H1fooQ8VIK3 CT030657.3-201ENSMUST00000222707 1200 ntBASIC10.73□□□□□ -0.69
H1fooQ8VIK3 AC154305.4-201ENSMUST00000224520 614 ntBASIC10.73□□□□□ -0.69
H1fooQ8VIK3 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
H1fooQ8VIK3 Gm5356-201ENSMUST00000093326 615 ntBASIC10.73□□□□□ -0.69
H1fooQ8VIK3 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
H1fooQ8VIK3 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.73□□□□□ -0.69
H1fooQ8VIK3 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
H1fooQ8VIK3 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
H1fooQ8VIK3 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
H1fooQ8VIK3 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC10.73□□□□□ -0.69
H1fooQ8VIK3 Gm9816-201ENSMUST00000122292 1414 ntBASIC10.73□□□□□ -0.69
H1fooQ8VIK3 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
H1fooQ8VIK3 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
H1fooQ8VIK3 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
H1fooQ8VIK3 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
H1fooQ8VIK3 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
H1fooQ8VIK3 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
H1fooQ8VIK3 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
H1fooQ8VIK3 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
H1fooQ8VIK3 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC10.73□□□□□ -0.69
H1fooQ8VIK3 Gm42748-201ENSMUST00000199354 2341 ntBASIC10.73□□□□□ -0.69
H1fooQ8VIK3 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
H1fooQ8VIK3 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
H1fooQ8VIK3 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
H1fooQ8VIK3 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
H1fooQ8VIK3 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
H1fooQ8VIK3 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
H1fooQ8VIK3 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
H1fooQ8VIK3 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
H1fooQ8VIK3 Gm7114-201ENSMUST00000190159 1789 ntBASIC10.72□□□□□ -0.69
H1fooQ8VIK3 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
H1fooQ8VIK3 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
H1fooQ8VIK3 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
H1fooQ8VIK3 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
H1fooQ8VIK3 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
H1fooQ8VIK3 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
H1fooQ8VIK3 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
H1fooQ8VIK3 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
H1fooQ8VIK3 Gm38385-201ENSMUST00000194454 2351 ntBASIC10.72□□□□□ -0.69
H1fooQ8VIK3 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
H1fooQ8VIK3 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.72□□□□□ -0.69
H1fooQ8VIK3 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
H1fooQ8VIK3 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC10.72□□□□□ -0.69
H1fooQ8VIK3 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
H1fooQ8VIK3 Ighv5-13-201ENSMUST00000193550 290 ntBASIC10.72□□□□□ -0.69
H1fooQ8VIK3 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC10.72□□□□□ -0.69
H1fooQ8VIK3 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC10.72□□□□□ -0.69
H1fooQ8VIK3 Gm8598-201ENSMUST00000221184 836 ntBASIC10.72□□□□□ -0.69
H1fooQ8VIK3 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
H1fooQ8VIK3 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
H1fooQ8VIK3 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
H1fooQ8VIK3 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
H1fooQ8VIK3 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
H1fooQ8VIK3 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
H1fooQ8VIK3 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
H1fooQ8VIK3 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
H1fooQ8VIK3 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
H1fooQ8VIK3 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
H1fooQ8VIK3 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
H1fooQ8VIK3 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
H1fooQ8VIK3 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
H1fooQ8VIK3 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
H1fooQ8VIK3 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
H1fooQ8VIK3 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
H1fooQ8VIK3 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
H1fooQ8VIK3 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
H1fooQ8VIK3 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
H1fooQ8VIK3 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
H1fooQ8VIK3 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms