Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpa1Q8VEE4 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpa1Q8VEE4 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa1Q8VEE4 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Rpa1Q8VEE4 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa1Q8VEE4 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa1Q8VEE4 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Rpa1Q8VEE4 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.94□□□□□ -0.34
Rpa1Q8VEE4 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa1Q8VEE4 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa1Q8VEE4 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa1Q8VEE4 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Rpa1Q8VEE4 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa1Q8VEE4 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Rpa1Q8VEE4 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa1Q8VEE4 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa1Q8VEE4 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.94□□□□□ -0.34
Rpa1Q8VEE4 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa1Q8VEE4 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa1Q8VEE4 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa1Q8VEE4 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Rpa1Q8VEE4 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Rpa1Q8VEE4 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa1Q8VEE4 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa1Q8VEE4 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa1Q8VEE4 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa1Q8VEE4 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa1Q8VEE4 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa1Q8VEE4 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa1Q8VEE4 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa1Q8VEE4 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa1Q8VEE4 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa1Q8VEE4 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa1Q8VEE4 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa1Q8VEE4 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa1Q8VEE4 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa1Q8VEE4 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.94□□□□□ -0.34
Rpa1Q8VEE4 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa1Q8VEE4 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa1Q8VEE4 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpa1Q8VEE4 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpa1Q8VEE4 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpa1Q8VEE4 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpa1Q8VEE4 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpa1Q8VEE4 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpa1Q8VEE4 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Rpa1Q8VEE4 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpa1Q8VEE4 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rpa1Q8VEE4 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Rpa1Q8VEE4 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.93□□□□□ -0.34
Rpa1Q8VEE4 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpa1Q8VEE4 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Rpa1Q8VEE4 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpa1Q8VEE4 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.93□□□□□ -0.34
Rpa1Q8VEE4 Gm25144-201ENSMUST00000179561 110 ntBASIC12.93□□□□□ -0.34
Rpa1Q8VEE4 Gm25352-201ENSMUST00000179815 110 ntBASIC12.93□□□□□ -0.34
Rpa1Q8VEE4 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rpa1Q8VEE4 Gm44124-201ENSMUST00000204159 472 ntBASIC12.93□□□□□ -0.34
Rpa1Q8VEE4 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.93□□□□□ -0.34
Rpa1Q8VEE4 Gm17795-201ENSMUST00000214505 757 ntBASIC12.93□□□□□ -0.34
Rpa1Q8VEE4 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpa1Q8VEE4 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpa1Q8VEE4 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.93□□□□□ -0.34
Rpa1Q8VEE4 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rpa1Q8VEE4 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpa1Q8VEE4 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.93□□□□□ -0.34
Rpa1Q8VEE4 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpa1Q8VEE4 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpa1Q8VEE4 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Rpa1Q8VEE4 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Rpa1Q8VEE4 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpa1Q8VEE4 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa1Q8VEE4 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Rpa1Q8VEE4 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa1Q8VEE4 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa1Q8VEE4 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa1Q8VEE4 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Rpa1Q8VEE4 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa1Q8VEE4 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa1Q8VEE4 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa1Q8VEE4 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa1Q8VEE4 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa1Q8VEE4 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa1Q8VEE4 Gm15920-201ENSMUST00000118998 402 ntBASIC12.92□□□□□ -0.34
Rpa1Q8VEE4 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Rpa1Q8VEE4 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.92□□□□□ -0.34
Rpa1Q8VEE4 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa1Q8VEE4 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa1Q8VEE4 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa1Q8VEE4 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.92□□□□□ -0.34
Rpa1Q8VEE4 CT010431.1-201ENSMUST00000221249 1080 ntBASIC12.92□□□□□ -0.34
Rpa1Q8VEE4 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa1Q8VEE4 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa1Q8VEE4 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa1Q8VEE4 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa1Q8VEE4 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa1Q8VEE4 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa1Q8VEE4 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa1Q8VEE4 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpa1Q8VEE4 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms