Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Gm27627-201ENSMUST00000183644 150 ntBASIC17.98■□□□□ 0.47
Cd109Q8R422 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC17.98■□□□□ 0.47
Cd109Q8R422 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC17.98■□□□□ 0.47
Cd109Q8R422 Gm5369-201ENSMUST00000217499 588 ntBASIC17.98■□□□□ 0.47
Cd109Q8R422 Dhrs4-202ENSMUST00000226168 828 ntBASIC17.98■□□□□ 0.47
Cd109Q8R422 Gm10371-202ENSMUST00000228010 1081 ntBASIC17.98■□□□□ 0.47
Cd109Q8R422 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cd109Q8R422 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cd109Q8R422 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cd109Q8R422 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cd109Q8R422 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cd109Q8R422 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cd109Q8R422 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cd109Q8R422 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Cd109Q8R422 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cd109Q8R422 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cd109Q8R422 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cd109Q8R422 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cd109Q8R422 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC17.97■□□□□ 0.47
Cd109Q8R422 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cd109Q8R422 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cd109Q8R422 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cd109Q8R422 Gm23949-201ENSMUST00000104027 127 ntBASIC17.97■□□□□ 0.47
Cd109Q8R422 n-R5s14-201ENSMUST00000122688 107 ntBASIC17.97■□□□□ 0.47
Cd109Q8R422 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC17.97■□□□□ 0.47
Cd109Q8R422 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC17.97■□□□□ 0.47
Cd109Q8R422 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC17.97■□□□□ 0.47
Cd109Q8R422 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC17.97■□□□□ 0.47
Cd109Q8R422 Gm5523-201ENSMUST00000180415 997 ntBASIC17.97■□□□□ 0.47
Cd109Q8R422 Gm42997-202ENSMUST00000200321 985 ntBASIC17.97■□□□□ 0.47
Cd109Q8R422 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cd109Q8R422 Gm44958-201ENSMUST00000203734 736 ntBASIC17.97■□□□□ 0.47
Cd109Q8R422 Gm43962-201ENSMUST00000203898 190 ntBASIC17.97■□□□□ 0.47
Cd109Q8R422 Gm14267-206ENSMUST00000226870 1209 ntBASIC17.97■□□□□ 0.47
Cd109Q8R422 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cd109Q8R422 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cd109Q8R422 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Cd109Q8R422 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cd109Q8R422 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Cd109Q8R422 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cd109Q8R422 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC17.96■□□□□ 0.47
Cd109Q8R422 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cd109Q8R422 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cd109Q8R422 Gm38391-201ENSMUST00000191720 4069 ntBASIC17.96■□□□□ 0.47
Cd109Q8R422 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cd109Q8R422 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cd109Q8R422 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Cd109Q8R422 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cd109Q8R422 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cd109Q8R422 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cd109Q8R422 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cd109Q8R422 Gm11989-201ENSMUST00000117240 672 ntBASIC17.96■□□□□ 0.47
Cd109Q8R422 Gm11362-201ENSMUST00000118838 850 ntBASIC17.96■□□□□ 0.47
Cd109Q8R422 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC17.96■□□□□ 0.47
Cd109Q8R422 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC17.96■□□□□ 0.47
Cd109Q8R422 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC17.96■□□□□ 0.47
Cd109Q8R422 AC093022.5-201ENSMUST00000226841 1079 ntBASIC17.96■□□□□ 0.47
Cd109Q8R422 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Cd109Q8R422 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cd109Q8R422 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC17.96■□□□□ 0.47
Cd109Q8R422 Gm42840-201ENSMUST00000200303 2251 ntBASIC17.96■□□□□ 0.47
Cd109Q8R422 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cd109Q8R422 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cd109Q8R422 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Cd109Q8R422 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC17.95■□□□□ 0.46
Cd109Q8R422 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cd109Q8R422 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cd109Q8R422 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cd109Q8R422 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cd109Q8R422 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cd109Q8R422 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cd109Q8R422 Gm15515-201ENSMUST00000117827 822 ntBASIC17.95■□□□□ 0.46
Cd109Q8R422 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC17.95■□□□□ 0.46
Cd109Q8R422 Gm15711-201ENSMUST00000118889 535 ntBASIC17.95■□□□□ 0.46
Cd109Q8R422 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC17.95■□□□□ 0.46
Cd109Q8R422 Gm14760-201ENSMUST00000121831 999 ntBASIC17.95■□□□□ 0.46
Cd109Q8R422 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC17.95■□□□□ 0.46
Cd109Q8R422 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC17.95■□□□□ 0.46
Cd109Q8R422 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC17.95■□□□□ 0.46
Cd109Q8R422 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC17.95■□□□□ 0.46
Cd109Q8R422 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC17.95■□□□□ 0.46
Cd109Q8R422 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cd109Q8R422 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cd109Q8R422 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cd109Q8R422 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cd109Q8R422 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cd109Q8R422 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Cd109Q8R422 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Cd109Q8R422 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cd109Q8R422 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cd109Q8R422 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cd109Q8R422 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cd109Q8R422 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cd109Q8R422 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Cd109Q8R422 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC17.95■□□□□ 0.46
Cd109Q8R422 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC17.95■□□□□ 0.46
Cd109Q8R422 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC17.95■□□□□ 0.46
Cd109Q8R422 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cd109Q8R422 Matn2-206ENSMUST00000228570 2798 ntBASIC17.94■□□□□ 0.46
Cd109Q8R422 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms