Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp7Q8R1T1 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp7Q8R1T1 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp7Q8R1T1 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Chmp7Q8R1T1 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Chmp7Q8R1T1 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp7Q8R1T1 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Chmp7Q8R1T1 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Chmp7Q8R1T1 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Chmp7Q8R1T1 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Chmp7Q8R1T1 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC16.33■□□□□ 0.21
Chmp7Q8R1T1 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.33■□□□□ 0.21
Chmp7Q8R1T1 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Chmp7Q8R1T1 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Chmp7Q8R1T1 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Chmp7Q8R1T1 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Chmp7Q8R1T1 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp7Q8R1T1 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp7Q8R1T1 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp7Q8R1T1 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Chmp7Q8R1T1 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp7Q8R1T1 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC16.33■□□□□ 0.2
Chmp7Q8R1T1 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Chmp7Q8R1T1 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC16.33■□□□□ 0.2
Chmp7Q8R1T1 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp7Q8R1T1 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp7Q8R1T1 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp7Q8R1T1 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp7Q8R1T1 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp7Q8R1T1 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp7Q8R1T1 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp7Q8R1T1 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Chmp7Q8R1T1 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp7Q8R1T1 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp7Q8R1T1 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Chmp7Q8R1T1 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp7Q8R1T1 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp7Q8R1T1 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp7Q8R1T1 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp7Q8R1T1 Gm13315-201ENSMUST00000120376 991 ntBASIC16.32■□□□□ 0.2
Chmp7Q8R1T1 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp7Q8R1T1 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC16.32■□□□□ 0.2
Chmp7Q8R1T1 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp7Q8R1T1 Gm22902-201ENSMUST00000158488 302 ntBASIC16.32■□□□□ 0.2
Chmp7Q8R1T1 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC16.32■□□□□ 0.2
Chmp7Q8R1T1 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp7Q8R1T1 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp7Q8R1T1 Gm28882-201ENSMUST00000185504 314 ntBASIC16.32■□□□□ 0.2
Chmp7Q8R1T1 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC16.32■□□□□ 0.2
Chmp7Q8R1T1 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp7Q8R1T1 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp7Q8R1T1 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC16.32■□□□□ 0.2
Chmp7Q8R1T1 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp7Q8R1T1 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC16.32■□□□□ 0.2
Chmp7Q8R1T1 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC16.32■□□□□ 0.2
Chmp7Q8R1T1 Gm39404-201ENSMUST00000216350 313 ntBASIC16.32■□□□□ 0.2
Chmp7Q8R1T1 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC16.32■□□□□ 0.2
Chmp7Q8R1T1 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Chmp7Q8R1T1 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp7Q8R1T1 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp7Q8R1T1 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp7Q8R1T1 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp7Q8R1T1 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Chmp7Q8R1T1 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp7Q8R1T1 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp7Q8R1T1 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp7Q8R1T1 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp7Q8R1T1 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp7Q8R1T1 Gm45242-201ENSMUST00000210666 2129 ntBASIC16.31■□□□□ 0.2
Chmp7Q8R1T1 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp7Q8R1T1 CT025610.1-201ENSMUST00000224552 1786 ntBASIC16.31■□□□□ 0.2
Chmp7Q8R1T1 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp7Q8R1T1 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp7Q8R1T1 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp7Q8R1T1 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp7Q8R1T1 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp7Q8R1T1 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC16.31■□□□□ 0.2
Chmp7Q8R1T1 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Chmp7Q8R1T1 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp7Q8R1T1 Gm5863-201ENSMUST00000121760 1008 ntBASIC16.31■□□□□ 0.2
Chmp7Q8R1T1 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp7Q8R1T1 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp7Q8R1T1 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC16.31■□□□□ 0.2
Chmp7Q8R1T1 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC16.31■□□□□ 0.2
Chmp7Q8R1T1 Gm8913-201ENSMUST00000209491 641 ntBASIC16.31■□□□□ 0.2
Chmp7Q8R1T1 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC16.31■□□□□ 0.2
Chmp7Q8R1T1 AC125209.1-201ENSMUST00000225812 766 ntBASIC16.31■□□□□ 0.2
Chmp7Q8R1T1 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp7Q8R1T1 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Chmp7Q8R1T1 Gm10076-201ENSMUST00000073238 384 ntBASIC16.31■□□□□ 0.2
Chmp7Q8R1T1 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC16.31■□□□□ 0.2
Chmp7Q8R1T1 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp7Q8R1T1 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp7Q8R1T1 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp7Q8R1T1 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC16.31■□□□□ 0.2
Chmp7Q8R1T1 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp7Q8R1T1 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Chmp7Q8R1T1 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp7Q8R1T1 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp7Q8R1T1 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms