Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd3Q8R1N4 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd3Q8R1N4 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd3Q8R1N4 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd3Q8R1N4 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.8□□□□□ -0.36
Nudcd3Q8R1N4 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd3Q8R1N4 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd3Q8R1N4 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd3Q8R1N4 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nudcd3Q8R1N4 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd3Q8R1N4 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd3Q8R1N4 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd3Q8R1N4 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd3Q8R1N4 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd3Q8R1N4 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd3Q8R1N4 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.79□□□□□ -0.36
Nudcd3Q8R1N4 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd3Q8R1N4 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Nudcd3Q8R1N4 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd3Q8R1N4 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd3Q8R1N4 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd3Q8R1N4 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd3Q8R1N4 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Nudcd3Q8R1N4 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd3Q8R1N4 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.79□□□□□ -0.36
Nudcd3Q8R1N4 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd3Q8R1N4 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd3Q8R1N4 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd3Q8R1N4 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd3Q8R1N4 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.79□□□□□ -0.36
Nudcd3Q8R1N4 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd3Q8R1N4 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.79□□□□□ -0.36
Nudcd3Q8R1N4 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Nudcd3Q8R1N4 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd3Q8R1N4 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nudcd3Q8R1N4 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd3Q8R1N4 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd3Q8R1N4 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd3Q8R1N4 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Nudcd3Q8R1N4 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd3Q8R1N4 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.79□□□□□ -0.36
Nudcd3Q8R1N4 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd3Q8R1N4 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nudcd3Q8R1N4 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nudcd3Q8R1N4 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nudcd3Q8R1N4 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.78□□□□□ -0.36
Nudcd3Q8R1N4 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nudcd3Q8R1N4 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nudcd3Q8R1N4 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nudcd3Q8R1N4 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nudcd3Q8R1N4 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Nudcd3Q8R1N4 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nudcd3Q8R1N4 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nudcd3Q8R1N4 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nudcd3Q8R1N4 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nudcd3Q8R1N4 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Nudcd3Q8R1N4 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nudcd3Q8R1N4 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nudcd3Q8R1N4 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nudcd3Q8R1N4 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nudcd3Q8R1N4 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nudcd3Q8R1N4 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.78□□□□□ -0.36
Nudcd3Q8R1N4 Gm6736-201ENSMUST00000166583 948 ntBASIC12.78□□□□□ -0.36
Nudcd3Q8R1N4 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.78□□□□□ -0.36
Nudcd3Q8R1N4 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.78□□□□□ -0.36
Nudcd3Q8R1N4 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nudcd3Q8R1N4 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nudcd3Q8R1N4 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nudcd3Q8R1N4 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nudcd3Q8R1N4 Gm20445-201ENSMUST00000061905 565 ntBASIC12.78□□□□□ -0.36
Nudcd3Q8R1N4 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nudcd3Q8R1N4 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nudcd3Q8R1N4 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.78□□□□□ -0.36
Nudcd3Q8R1N4 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.78□□□□□ -0.36
Nudcd3Q8R1N4 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nudcd3Q8R1N4 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nudcd3Q8R1N4 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.78□□□□□ -0.36
Nudcd3Q8R1N4 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nudcd3Q8R1N4 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.78□□□□□ -0.36
Nudcd3Q8R1N4 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nudcd3Q8R1N4 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nudcd3Q8R1N4 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Nudcd3Q8R1N4 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nudcd3Q8R1N4 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Nudcd3Q8R1N4 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Nudcd3Q8R1N4 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Nudcd3Q8R1N4 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nudcd3Q8R1N4 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Nudcd3Q8R1N4 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Nudcd3Q8R1N4 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Nudcd3Q8R1N4 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nudcd3Q8R1N4 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nudcd3Q8R1N4 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nudcd3Q8R1N4 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.77□□□□□ -0.37
Nudcd3Q8R1N4 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nudcd3Q8R1N4 Gm27702-201ENSMUST00000184512 56 ntBASIC12.77□□□□□ -0.37
Nudcd3Q8R1N4 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.77□□□□□ -0.37
Nudcd3Q8R1N4 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.77□□□□□ -0.37
Nudcd3Q8R1N4 Gm9797-201ENSMUST00000052902 613 ntBASIC12.77□□□□□ -0.37
Nudcd3Q8R1N4 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms