Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clrn1Q8K445 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clrn1Q8K445 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Clrn1Q8K445 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clrn1Q8K445 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Clrn1Q8K445 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clrn1Q8K445 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clrn1Q8K445 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.09□□□□□ -0.47
Clrn1Q8K445 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Clrn1Q8K445 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.09□□□□□ -0.47
Clrn1Q8K445 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.09□□□□□ -0.47
Clrn1Q8K445 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Clrn1Q8K445 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Clrn1Q8K445 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clrn1Q8K445 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clrn1Q8K445 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.08□□□□□ -0.48
Clrn1Q8K445 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clrn1Q8K445 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clrn1Q8K445 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Clrn1Q8K445 Gm15824-201ENSMUST00000119516 955 ntBASIC12.08□□□□□ -0.48
Clrn1Q8K445 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Clrn1Q8K445 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.08□□□□□ -0.48
Clrn1Q8K445 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Clrn1Q8K445 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clrn1Q8K445 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.08□□□□□ -0.48
Clrn1Q8K445 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.08□□□□□ -0.48
Clrn1Q8K445 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Clrn1Q8K445 Gm37042-201ENSMUST00000193816 581 ntBASIC12.08□□□□□ -0.48
Clrn1Q8K445 Gm18187-201ENSMUST00000196476 984 ntBASIC12.08□□□□□ -0.48
Clrn1Q8K445 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.08□□□□□ -0.48
Clrn1Q8K445 Gm43818-201ENSMUST00000200605 466 ntBASIC12.08□□□□□ -0.48
Clrn1Q8K445 Gm6266-201ENSMUST00000203844 806 ntBASIC12.08□□□□□ -0.48
Clrn1Q8K445 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.08□□□□□ -0.48
Clrn1Q8K445 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Clrn1Q8K445 Gm40466-201ENSMUST00000212174 422 ntBASIC12.08□□□□□ -0.48
Clrn1Q8K445 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.08□□□□□ -0.48
Clrn1Q8K445 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.08□□□□□ -0.48
Clrn1Q8K445 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.08□□□□□ -0.48
Clrn1Q8K445 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clrn1Q8K445 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clrn1Q8K445 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Clrn1Q8K445 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clrn1Q8K445 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Clrn1Q8K445 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.08□□□□□ -0.48
Clrn1Q8K445 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Clrn1Q8K445 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clrn1Q8K445 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clrn1Q8K445 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clrn1Q8K445 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.08□□□□□ -0.48
Clrn1Q8K445 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Clrn1Q8K445 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Clrn1Q8K445 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.08□□□□□ -0.48
Clrn1Q8K445 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Clrn1Q8K445 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.08□□□□□ -0.48
Clrn1Q8K445 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.07□□□□□ -0.48
Clrn1Q8K445 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn1Q8K445 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Clrn1Q8K445 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn1Q8K445 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn1Q8K445 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn1Q8K445 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn1Q8K445 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn1Q8K445 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn1Q8K445 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn1Q8K445 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn1Q8K445 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Clrn1Q8K445 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn1Q8K445 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn1Q8K445 Gm16177-201ENSMUST00000120728 718 ntBASIC12.07□□□□□ -0.48
Clrn1Q8K445 Gm12291-201ENSMUST00000121627 311 ntBASIC12.07□□□□□ -0.48
Clrn1Q8K445 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.07□□□□□ -0.48
Clrn1Q8K445 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.07□□□□□ -0.48
Clrn1Q8K445 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Clrn1Q8K445 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.07□□□□□ -0.48
Clrn1Q8K445 Gm29127-201ENSMUST00000188304 517 ntBASIC12.07□□□□□ -0.48
Clrn1Q8K445 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn1Q8K445 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.07□□□□□ -0.48
Clrn1Q8K445 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.07□□□□□ -0.48
Clrn1Q8K445 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.07□□□□□ -0.48
Clrn1Q8K445 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn1Q8K445 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.07□□□□□ -0.48
Clrn1Q8K445 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn1Q8K445 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn1Q8K445 Gm19163-201ENSMUST00000223313 780 ntBASIC12.07□□□□□ -0.48
Clrn1Q8K445 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn1Q8K445 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn1Q8K445 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn1Q8K445 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn1Q8K445 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn1Q8K445 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Clrn1Q8K445 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn1Q8K445 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn1Q8K445 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.07□□□□□ -0.48
Clrn1Q8K445 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Clrn1Q8K445 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Clrn1Q8K445 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn1Q8K445 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn1Q8K445 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Clrn1Q8K445 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.07□□□□□ -0.48
Clrn1Q8K445 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms