Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cchcr1Q8K2I2 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cchcr1Q8K2I2 AC166051.1-201ENSMUST00000214313 210 ntBASIC15.14■□□□□ 0.01
Cchcr1Q8K2I2 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC15.14■□□□□ 0.01
Cchcr1Q8K2I2 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cchcr1Q8K2I2 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cchcr1Q8K2I2 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Cchcr1Q8K2I2 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cchcr1Q8K2I2 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cchcr1Q8K2I2 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC15.14■□□□□ 0.01
Cchcr1Q8K2I2 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cchcr1Q8K2I2 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cchcr1Q8K2I2 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cchcr1Q8K2I2 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cchcr1Q8K2I2 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cchcr1Q8K2I2 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cchcr1Q8K2I2 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cchcr1Q8K2I2 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC15.14■□□□□ 0.01
Cchcr1Q8K2I2 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cchcr1Q8K2I2 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cchcr1Q8K2I2 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cchcr1Q8K2I2 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cchcr1Q8K2I2 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC15.13■□□□□ 0.01
Cchcr1Q8K2I2 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC15.13■□□□□ 0.01
Cchcr1Q8K2I2 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cchcr1Q8K2I2 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
Cchcr1Q8K2I2 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cchcr1Q8K2I2 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Cchcr1Q8K2I2 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cchcr1Q8K2I2 Gm8099-201ENSMUST00000200510 742 ntBASIC15.13■□□□□ 0.01
Cchcr1Q8K2I2 AC134254.1-201ENSMUST00000221362 167 ntBASIC15.13■□□□□ 0.01
Cchcr1Q8K2I2 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cchcr1Q8K2I2 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cchcr1Q8K2I2 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cchcr1Q8K2I2 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cchcr1Q8K2I2 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cchcr1Q8K2I2 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cchcr1Q8K2I2 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cchcr1Q8K2I2 Gm6180-201ENSMUST00000065243 498 ntBASIC15.13■□□□□ 0.01
Cchcr1Q8K2I2 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC15.13■□□□□ 0.01
Cchcr1Q8K2I2 Gm37324-201ENSMUST00000194500 4504 ntBASIC15.13■□□□□ 0.01
Cchcr1Q8K2I2 Gm44942-201ENSMUST00000096093 2072 ntBASIC15.13■□□□□ 0.01
Cchcr1Q8K2I2 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cchcr1Q8K2I2 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cchcr1Q8K2I2 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC15.13■□□□□ 0.01
Cchcr1Q8K2I2 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cchcr1Q8K2I2 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cchcr1Q8K2I2 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cchcr1Q8K2I2 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC15.12■□□□□ 0.01
Cchcr1Q8K2I2 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cchcr1Q8K2I2 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC15.12■□□□□ 0.01
Cchcr1Q8K2I2 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Cchcr1Q8K2I2 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cchcr1Q8K2I2 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cchcr1Q8K2I2 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cchcr1Q8K2I2 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cchcr1Q8K2I2 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cchcr1Q8K2I2 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC15.12■□□□□ 0.01
Cchcr1Q8K2I2 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC15.12■□□□□ 0.01
Cchcr1Q8K2I2 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cchcr1Q8K2I2 Gm8805-201ENSMUST00000117848 313 ntBASIC15.12■□□□□ 0.01
Cchcr1Q8K2I2 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cchcr1Q8K2I2 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC15.12■□□□□ 0.01
Cchcr1Q8K2I2 Gm11918-201ENSMUST00000121660 179 ntBASIC15.12■□□□□ 0.01
Cchcr1Q8K2I2 Gm2231-201ENSMUST00000125661 612 ntBASIC15.12■□□□□ 0.01
Cchcr1Q8K2I2 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cchcr1Q8K2I2 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cchcr1Q8K2I2 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cchcr1Q8K2I2 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC15.12■□□□□ 0.01
Cchcr1Q8K2I2 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cchcr1Q8K2I2 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC15.12■□□□□ 0.01
Cchcr1Q8K2I2 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC15.12■□□□□ 0.01
Cchcr1Q8K2I2 AC154239.3-201ENSMUST00000226933 674 ntBASIC15.12■□□□□ 0.01
Cchcr1Q8K2I2 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cchcr1Q8K2I2 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Cchcr1Q8K2I2 CT009713.10-201ENSMUST00000225013 1986 ntBASIC15.12■□□□□ 0.01
Cchcr1Q8K2I2 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cchcr1Q8K2I2 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cchcr1Q8K2I2 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cchcr1Q8K2I2 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Cchcr1Q8K2I2 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cchcr1Q8K2I2 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cchcr1Q8K2I2 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cchcr1Q8K2I2 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Cchcr1Q8K2I2 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cchcr1Q8K2I2 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC15.12■□□□□ 0.01
Cchcr1Q8K2I2 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cchcr1Q8K2I2 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cchcr1Q8K2I2 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cchcr1Q8K2I2 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cchcr1Q8K2I2 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Cchcr1Q8K2I2 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cchcr1Q8K2I2 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
Cchcr1Q8K2I2 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cchcr1Q8K2I2 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cchcr1Q8K2I2 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cchcr1Q8K2I2 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cchcr1Q8K2I2 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cchcr1Q8K2I2 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cchcr1Q8K2I2 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms