Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Alx1Q8C8B0 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Alx1Q8C8B0 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Alx1Q8C8B0 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC14.89□□□□□ -0.03
Alx1Q8C8B0 AC167669.2-201ENSMUST00000224417 1620 ntBASIC14.89□□□□□ -0.03
Alx1Q8C8B0 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Alx1Q8C8B0 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Alx1Q8C8B0 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC14.89□□□□□ -0.03
Alx1Q8C8B0 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC14.89□□□□□ -0.03
Alx1Q8C8B0 Rmrp-201ENSMUST00000157463 271 ntBASIC14.89□□□□□ -0.03
Alx1Q8C8B0 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
Alx1Q8C8B0 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC14.89□□□□□ -0.03
Alx1Q8C8B0 Gm8176-201ENSMUST00000191297 1099 ntBASIC14.89□□□□□ -0.03
Alx1Q8C8B0 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC14.89□□□□□ -0.03
Alx1Q8C8B0 Gm45865-201ENSMUST00000211815 945 ntBASIC14.89□□□□□ -0.03
Alx1Q8C8B0 Gm21769-201ENSMUST00000211922 111 ntBASIC14.89□□□□□ -0.03
Alx1Q8C8B0 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Alx1Q8C8B0 AC132384.14-201ENSMUST00000219346 1147 ntBASIC14.89□□□□□ -0.03
Alx1Q8C8B0 AC166095.1-201ENSMUST00000223731 1241 ntBASIC14.89□□□□□ -0.03
Alx1Q8C8B0 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.89□□□□□ -0.03
Alx1Q8C8B0 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Alx1Q8C8B0 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.89□□□□□ -0.03
Alx1Q8C8B0 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Alx1Q8C8B0 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Alx1Q8C8B0 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Alx1Q8C8B0 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Alx1Q8C8B0 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Alx1Q8C8B0 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Alx1Q8C8B0 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Alx1Q8C8B0 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Alx1Q8C8B0 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Alx1Q8C8B0 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Alx1Q8C8B0 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Alx1Q8C8B0 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Alx1Q8C8B0 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Alx1Q8C8B0 Gm18227-201ENSMUST00000211082 1468 ntBASIC14.89□□□□□ -0.03
Alx1Q8C8B0 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Alx1Q8C8B0 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Alx1Q8C8B0 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Alx1Q8C8B0 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Alx1Q8C8B0 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.88□□□□□ -0.03
Alx1Q8C8B0 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Alx1Q8C8B0 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Alx1Q8C8B0 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Alx1Q8C8B0 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Alx1Q8C8B0 Gm11531-201ENSMUST00000117614 555 ntBASIC14.88□□□□□ -0.03
Alx1Q8C8B0 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Alx1Q8C8B0 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Alx1Q8C8B0 Gm5597-201ENSMUST00000182353 1193 ntBASIC14.88□□□□□ -0.03
Alx1Q8C8B0 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC14.88□□□□□ -0.03
Alx1Q8C8B0 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC14.88□□□□□ -0.03
Alx1Q8C8B0 Gm43179-201ENSMUST00000198797 275 ntBASIC14.88□□□□□ -0.03
Alx1Q8C8B0 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC14.88□□□□□ -0.03
Alx1Q8C8B0 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Alx1Q8C8B0 CT025533.2-201ENSMUST00000228715 1248 ntBASIC14.88□□□□□ -0.03
Alx1Q8C8B0 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Alx1Q8C8B0 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC14.88□□□□□ -0.03
Alx1Q8C8B0 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Alx1Q8C8B0 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Alx1Q8C8B0 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Alx1Q8C8B0 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Alx1Q8C8B0 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Alx1Q8C8B0 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Alx1Q8C8B0 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Alx1Q8C8B0 Gm19221-201ENSMUST00000221827 1477 ntBASIC14.88□□□□□ -0.03
Alx1Q8C8B0 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Alx1Q8C8B0 Gm2673-201ENSMUST00000120958 1608 ntBASIC14.88□□□□□ -0.03
Alx1Q8C8B0 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Alx1Q8C8B0 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Alx1Q8C8B0 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Alx1Q8C8B0 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Alx1Q8C8B0 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.87□□□□□ -0.03
Alx1Q8C8B0 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Alx1Q8C8B0 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Alx1Q8C8B0 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Alx1Q8C8B0 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Alx1Q8C8B0 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Alx1Q8C8B0 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Alx1Q8C8B0 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Alx1Q8C8B0 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Alx1Q8C8B0 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Alx1Q8C8B0 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Alx1Q8C8B0 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Alx1Q8C8B0 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Alx1Q8C8B0 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Alx1Q8C8B0 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
Alx1Q8C8B0 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Alx1Q8C8B0 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Alx1Q8C8B0 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Alx1Q8C8B0 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Alx1Q8C8B0 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Alx1Q8C8B0 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Alx1Q8C8B0 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC14.87□□□□□ -0.03
Alx1Q8C8B0 Gm11222-201ENSMUST00000119005 738 ntBASIC14.87□□□□□ -0.03
Alx1Q8C8B0 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Alx1Q8C8B0 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Alx1Q8C8B0 Gm7895-201ENSMUST00000187459 1173 ntBASIC14.87□□□□□ -0.03
Alx1Q8C8B0 Gm18304-201ENSMUST00000189162 546 ntBASIC14.87□□□□□ -0.03
Alx1Q8C8B0 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC14.87□□□□□ -0.03
Alx1Q8C8B0 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms