Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska3Q8C263 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska3Q8C263 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska3Q8C263 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska3Q8C263 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska3Q8C263 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ska3Q8C263 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska3Q8C263 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska3Q8C263 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska3Q8C263 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska3Q8C263 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska3Q8C263 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska3Q8C263 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ska3Q8C263 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ska3Q8C263 Gm12291-201ENSMUST00000121627 311 ntBASIC12.06□□□□□ -0.48
Ska3Q8C263 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.06□□□□□ -0.48
Ska3Q8C263 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ska3Q8C263 Mir1982-201ENSMUST00000157368 74 ntBASIC12.06□□□□□ -0.48
Ska3Q8C263 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska3Q8C263 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.06□□□□□ -0.48
Ska3Q8C263 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.06□□□□□ -0.48
Ska3Q8C263 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.06□□□□□ -0.48
Ska3Q8C263 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska3Q8C263 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska3Q8C263 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska3Q8C263 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ska3Q8C263 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska3Q8C263 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska3Q8C263 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska3Q8C263 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.06□□□□□ -0.48
Ska3Q8C263 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ska3Q8C263 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.06□□□□□ -0.48
Ska3Q8C263 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska3Q8C263 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska3Q8C263 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska3Q8C263 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska3Q8C263 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ska3Q8C263 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska3Q8C263 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska3Q8C263 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ska3Q8C263 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ska3Q8C263 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ska3Q8C263 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ska3Q8C263 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ska3Q8C263 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ska3Q8C263 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ska3Q8C263 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ska3Q8C263 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ska3Q8C263 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ska3Q8C263 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ska3Q8C263 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ska3Q8C263 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ska3Q8C263 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ska3Q8C263 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ska3Q8C263 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ska3Q8C263 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ska3Q8C263 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ska3Q8C263 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ska3Q8C263 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.05□□□□□ -0.48
Ska3Q8C263 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.05□□□□□ -0.48
Ska3Q8C263 Gm8099-201ENSMUST00000200510 742 ntBASIC12.05□□□□□ -0.48
Ska3Q8C263 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ska3Q8C263 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.05□□□□□ -0.48
Ska3Q8C263 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.05□□□□□ -0.48
Ska3Q8C263 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ska3Q8C263 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ska3Q8C263 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.05□□□□□ -0.48
Ska3Q8C263 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.05□□□□□ -0.48
Ska3Q8C263 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ska3Q8C263 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ska3Q8C263 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ska3Q8C263 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ska3Q8C263 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ska3Q8C263 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ska3Q8C263 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.05□□□□□ -0.48
Ska3Q8C263 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ska3Q8C263 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.05□□□□□ -0.48
Ska3Q8C263 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ska3Q8C263 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ska3Q8C263 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ska3Q8C263 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ska3Q8C263 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.05□□□□□ -0.48
Ska3Q8C263 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ska3Q8C263 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ska3Q8C263 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ska3Q8C263 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ska3Q8C263 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.04□□□□□ -0.48
Ska3Q8C263 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Ska3Q8C263 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ska3Q8C263 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ska3Q8C263 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ska3Q8C263 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ska3Q8C263 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ska3Q8C263 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ska3Q8C263 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ska3Q8C263 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ska3Q8C263 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ska3Q8C263 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ska3Q8C263 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ska3Q8C263 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms