Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Sh3rf2Q8BZT2 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf2Q8BZT2 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf2Q8BZT2 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf2Q8BZT2 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.97□□□□□ -0.33
Sh3rf2Q8BZT2 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Sh3rf2Q8BZT2 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf2Q8BZT2 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf2Q8BZT2 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf2Q8BZT2 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.97□□□□□ -0.33
Sh3rf2Q8BZT2 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.97□□□□□ -0.33
Sh3rf2Q8BZT2 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.97□□□□□ -0.33
Sh3rf2Q8BZT2 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf2Q8BZT2 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf2Q8BZT2 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf2Q8BZT2 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.97□□□□□ -0.33
Sh3rf2Q8BZT2 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.97□□□□□ -0.33
Sh3rf2Q8BZT2 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf2Q8BZT2 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf2Q8BZT2 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf2Q8BZT2 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.97□□□□□ -0.33
Sh3rf2Q8BZT2 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.97□□□□□ -0.33
Sh3rf2Q8BZT2 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf2Q8BZT2 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.97□□□□□ -0.33
Sh3rf2Q8BZT2 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.97□□□□□ -0.33
Sh3rf2Q8BZT2 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf2Q8BZT2 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Sh3rf2Q8BZT2 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf2Q8BZT2 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf2Q8BZT2 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf2Q8BZT2 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Sh3rf2Q8BZT2 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf2Q8BZT2 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf2Q8BZT2 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf2Q8BZT2 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf2Q8BZT2 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf2Q8BZT2 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf2Q8BZT2 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf2Q8BZT2 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf2Q8BZT2 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Sh3rf2Q8BZT2 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.96□□□□□ -0.33
Sh3rf2Q8BZT2 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sh3rf2Q8BZT2 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sh3rf2Q8BZT2 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sh3rf2Q8BZT2 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sh3rf2Q8BZT2 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sh3rf2Q8BZT2 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Sh3rf2Q8BZT2 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sh3rf2Q8BZT2 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.33
Sh3rf2Q8BZT2 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sh3rf2Q8BZT2 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sh3rf2Q8BZT2 Gm24830-201ENSMUST00000102024 166 ntBASIC12.96□□□□□ -0.33
Sh3rf2Q8BZT2 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.96□□□□□ -0.33
Sh3rf2Q8BZT2 Gm13736-201ENSMUST00000119272 253 ntBASIC12.96□□□□□ -0.33
Sh3rf2Q8BZT2 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Sh3rf2Q8BZT2 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.96□□□□□ -0.33
Sh3rf2Q8BZT2 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.96□□□□□ -0.33
Sh3rf2Q8BZT2 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sh3rf2Q8BZT2 Gm16296-201ENSMUST00000159905 325 ntBASIC12.96□□□□□ -0.33
Sh3rf2Q8BZT2 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Sh3rf2Q8BZT2 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Sh3rf2Q8BZT2 Gm25890-201ENSMUST00000177643 165 ntBASIC12.96□□□□□ -0.33
Sh3rf2Q8BZT2 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.96□□□□□ -0.33
Sh3rf2Q8BZT2 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.96□□□□□ -0.33
Sh3rf2Q8BZT2 Gm22614-201ENSMUST00000178300 165 ntBASIC12.96□□□□□ -0.33
Sh3rf2Q8BZT2 Gm2383-201ENSMUST00000181461 807 ntBASIC12.96□□□□□ -0.33
Sh3rf2Q8BZT2 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Sh3rf2Q8BZT2 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.96□□□□□ -0.33
Sh3rf2Q8BZT2 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.96□□□□□ -0.33
Sh3rf2Q8BZT2 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.96□□□□□ -0.33
Sh3rf2Q8BZT2 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sh3rf2Q8BZT2 Gm22042-201ENSMUST00000082989 165 ntBASIC12.96□□□□□ -0.33
Sh3rf2Q8BZT2 Gm26232-201ENSMUST00000083360 166 ntBASIC12.96□□□□□ -0.33
Sh3rf2Q8BZT2 Gm24136-201ENSMUST00000083374 165 ntBASIC12.96□□□□□ -0.33
Sh3rf2Q8BZT2 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.96□□□□□ -0.33
Sh3rf2Q8BZT2 Gm26110-201ENSMUST00000083971 165 ntBASIC12.96□□□□□ -0.33
Sh3rf2Q8BZT2 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sh3rf2Q8BZT2 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Sh3rf2Q8BZT2 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Sh3rf2Q8BZT2 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.96□□□□□ -0.34
Sh3rf2Q8BZT2 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Sh3rf2Q8BZT2 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Sh3rf2Q8BZT2 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sh3rf2Q8BZT2 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sh3rf2Q8BZT2 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sh3rf2Q8BZT2 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Sh3rf2Q8BZT2 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sh3rf2Q8BZT2 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sh3rf2Q8BZT2 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sh3rf2Q8BZT2 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sh3rf2Q8BZT2 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.95□□□□□ -0.34
Sh3rf2Q8BZT2 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.95□□□□□ -0.34
Sh3rf2Q8BZT2 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sh3rf2Q8BZT2 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.95□□□□□ -0.34
Sh3rf2Q8BZT2 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sh3rf2Q8BZT2 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sh3rf2Q8BZT2 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sh3rf2Q8BZT2 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Sh3rf2Q8BZT2 Gm13813-201ENSMUST00000120998 787 ntBASIC12.95□□□□□ -0.34
Sh3rf2Q8BZT2 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms