Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SprnQ8BWU1 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.31□□□□□ -0.6
SprnQ8BWU1 Gm14760-201ENSMUST00000121831 999 ntBASIC11.31□□□□□ -0.6
SprnQ8BWU1 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.31□□□□□ -0.6
SprnQ8BWU1 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.31□□□□□ -0.6
SprnQ8BWU1 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.31□□□□□ -0.6
SprnQ8BWU1 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.31□□□□□ -0.6
SprnQ8BWU1 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.31□□□□□ -0.6
SprnQ8BWU1 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SprnQ8BWU1 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.31□□□□□ -0.6
SprnQ8BWU1 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SprnQ8BWU1 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SprnQ8BWU1 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SprnQ8BWU1 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SprnQ8BWU1 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SprnQ8BWU1 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SprnQ8BWU1 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SprnQ8BWU1 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.31□□□□□ -0.6
SprnQ8BWU1 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.31□□□□□ -0.6
SprnQ8BWU1 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
SprnQ8BWU1 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SprnQ8BWU1 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.31□□□□□ -0.6
SprnQ8BWU1 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SprnQ8BWU1 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SprnQ8BWU1 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SprnQ8BWU1 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SprnQ8BWU1 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SprnQ8BWU1 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.3□□□□□ -0.6
SprnQ8BWU1 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.3□□□□□ -0.6
SprnQ8BWU1 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SprnQ8BWU1 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SprnQ8BWU1 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
SprnQ8BWU1 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SprnQ8BWU1 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SprnQ8BWU1 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SprnQ8BWU1 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SprnQ8BWU1 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SprnQ8BWU1 Gm14127-201ENSMUST00000117906 678 ntBASIC11.3□□□□□ -0.6
SprnQ8BWU1 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
SprnQ8BWU1 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SprnQ8BWU1 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SprnQ8BWU1 Gm28631-201ENSMUST00000190740 334 ntBASIC11.3□□□□□ -0.6
SprnQ8BWU1 Gm37917-201ENSMUST00000194711 392 ntBASIC11.3□□□□□ -0.6
SprnQ8BWU1 Gm8515-201ENSMUST00000194852 576 ntBASIC11.3□□□□□ -0.6
SprnQ8BWU1 Gm43438-201ENSMUST00000198133 379 ntBASIC11.3□□□□□ -0.6
SprnQ8BWU1 Gm18018-201ENSMUST00000198273 408 ntBASIC11.3□□□□□ -0.6
SprnQ8BWU1 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.3□□□□□ -0.6
SprnQ8BWU1 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.3□□□□□ -0.6
SprnQ8BWU1 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.3□□□□□ -0.6
SprnQ8BWU1 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SprnQ8BWU1 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SprnQ8BWU1 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
SprnQ8BWU1 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SprnQ8BWU1 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SprnQ8BWU1 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
SprnQ8BWU1 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
SprnQ8BWU1 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
SprnQ8BWU1 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.3□□□□□ -0.6
SprnQ8BWU1 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SprnQ8BWU1 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SprnQ8BWU1 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SprnQ8BWU1 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.3□□□□□ -0.6
SprnQ8BWU1 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SprnQ8BWU1 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.3□□□□□ -0.6
SprnQ8BWU1 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SprnQ8BWU1 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.3□□□□□ -0.6
SprnQ8BWU1 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SprnQ8BWU1 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SprnQ8BWU1 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
SprnQ8BWU1 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SprnQ8BWU1 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SprnQ8BWU1 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
SprnQ8BWU1 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SprnQ8BWU1 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SprnQ8BWU1 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SprnQ8BWU1 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SprnQ8BWU1 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SprnQ8BWU1 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SprnQ8BWU1 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SprnQ8BWU1 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SprnQ8BWU1 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.29□□□□□ -0.6
SprnQ8BWU1 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.29□□□□□ -0.6
SprnQ8BWU1 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.29□□□□□ -0.6
SprnQ8BWU1 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC11.29□□□□□ -0.6
SprnQ8BWU1 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
SprnQ8BWU1 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SprnQ8BWU1 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.29□□□□□ -0.6
SprnQ8BWU1 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
SprnQ8BWU1 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SprnQ8BWU1 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.29□□□□□ -0.6
SprnQ8BWU1 Gm19078-201ENSMUST00000206311 727 ntBASIC11.29□□□□□ -0.6
SprnQ8BWU1 Gm45668-201ENSMUST00000211271 493 ntBASIC11.29□□□□□ -0.6
SprnQ8BWU1 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.29□□□□□ -0.6
SprnQ8BWU1 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SprnQ8BWU1 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SprnQ8BWU1 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SprnQ8BWU1 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SprnQ8BWU1 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.29□□□□□ -0.6
SprnQ8BWU1 Gm26315-201ENSMUST00000083890 321 ntBASIC11.29□□□□□ -0.6
SprnQ8BWU1 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms