Protein–RNA interactions for Protein: Q8BVF4

Ccdc30, Coiled-coil domain-containing protein 30, mousemouse

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc30Q8BVF4 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc30Q8BVF4 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
Ccdc30Q8BVF4 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc30Q8BVF4 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc30Q8BVF4 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc30Q8BVF4 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc30Q8BVF4 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Ccdc30Q8BVF4 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc30Q8BVF4 Dctn4-202ENSMUST00000223590 1530 ntBASIC16.5■□□□□ 0.23
Ccdc30Q8BVF4 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Ccdc30Q8BVF4 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ccdc30Q8BVF4 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc30Q8BVF4 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc30Q8BVF4 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc30Q8BVF4 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc30Q8BVF4 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc30Q8BVF4 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc30Q8BVF4 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc30Q8BVF4 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc30Q8BVF4 Gm23931-201ENSMUST00000103842 109 ntBASIC16.49■□□□□ 0.23
Ccdc30Q8BVF4 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc30Q8BVF4 Gm15824-201ENSMUST00000119516 955 ntBASIC16.49■□□□□ 0.23
Ccdc30Q8BVF4 Gm15703-201ENSMUST00000120250 880 ntBASIC16.49■□□□□ 0.23
Ccdc30Q8BVF4 Gm13394-201ENSMUST00000121658 1000 ntBASIC16.49■□□□□ 0.23
Ccdc30Q8BVF4 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ccdc30Q8BVF4 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc30Q8BVF4 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc30Q8BVF4 Gm26035-201ENSMUST00000083065 308 ntBASIC16.49■□□□□ 0.23
Ccdc30Q8BVF4 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc30Q8BVF4 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc30Q8BVF4 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc30Q8BVF4 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc30Q8BVF4 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc30Q8BVF4 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc30Q8BVF4 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc30Q8BVF4 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC16.48■□□□□ 0.23
Ccdc30Q8BVF4 Gm43579-201ENSMUST00000202387 1307 ntBASIC16.48■□□□□ 0.23
Ccdc30Q8BVF4 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc30Q8BVF4 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc30Q8BVF4 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc30Q8BVF4 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Ccdc30Q8BVF4 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Ccdc30Q8BVF4 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc30Q8BVF4 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc30Q8BVF4 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc30Q8BVF4 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Ccdc30Q8BVF4 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Ccdc30Q8BVF4 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC16.48■□□□□ 0.23
Ccdc30Q8BVF4 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC16.48■□□□□ 0.23
Ccdc30Q8BVF4 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc30Q8BVF4 Gm7809-201ENSMUST00000153199 742 ntBASIC16.48■□□□□ 0.23
Ccdc30Q8BVF4 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc30Q8BVF4 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC16.48■□□□□ 0.23
Ccdc30Q8BVF4 Gm8565-201ENSMUST00000183259 1014 ntBASIC16.48■□□□□ 0.23
Ccdc30Q8BVF4 AC140451.2-201ENSMUST00000228030 664 ntBASIC16.48■□□□□ 0.23
Ccdc30Q8BVF4 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc30Q8BVF4 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc30Q8BVF4 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc30Q8BVF4 n-R5s195-201ENSMUST00000082891 119 ntBASIC16.48■□□□□ 0.23
Ccdc30Q8BVF4 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc30Q8BVF4 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC16.48■□□□□ 0.23
Ccdc30Q8BVF4 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc30Q8BVF4 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc30Q8BVF4 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc30Q8BVF4 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc30Q8BVF4 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc30Q8BVF4 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc30Q8BVF4 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc30Q8BVF4 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc30Q8BVF4 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc30Q8BVF4 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Ccdc30Q8BVF4 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc30Q8BVF4 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc30Q8BVF4 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc30Q8BVF4 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC16.47■□□□□ 0.23
Ccdc30Q8BVF4 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Ccdc30Q8BVF4 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
Ccdc30Q8BVF4 Mir1982-201ENSMUST00000157368 74 ntBASIC16.47■□□□□ 0.23
Ccdc30Q8BVF4 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc30Q8BVF4 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Ccdc30Q8BVF4 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc30Q8BVF4 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Ccdc30Q8BVF4 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc30Q8BVF4 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc30Q8BVF4 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc30Q8BVF4 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc30Q8BVF4 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc30Q8BVF4 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc30Q8BVF4 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Ccdc30Q8BVF4 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc30Q8BVF4 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc30Q8BVF4 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc30Q8BVF4 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc30Q8BVF4 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc30Q8BVF4 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc30Q8BVF4 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc30Q8BVF4 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc30Q8BVF4 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc30Q8BVF4 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc30Q8BVF4 Gm44758-201ENSMUST00000206096 2068 ntBASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms