Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Cpsf4Q8BQZ5 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4Q8BQZ5 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.44□□□□□ -0.42
Cpsf4Q8BQZ5 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4Q8BQZ5 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Cpsf4Q8BQZ5 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4Q8BQZ5 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.43□□□□□ -0.42
Cpsf4Q8BQZ5 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cpsf4Q8BQZ5 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpsf4Q8BQZ5 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpsf4Q8BQZ5 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Cpsf4Q8BQZ5 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cpsf4Q8BQZ5 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.43□□□□□ -0.42
Cpsf4Q8BQZ5 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpsf4Q8BQZ5 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Cpsf4Q8BQZ5 Gm6447-201ENSMUST00000118905 835 ntBASIC12.43□□□□□ -0.42
Cpsf4Q8BQZ5 Gm22331-201ENSMUST00000158066 136 ntBASIC12.43□□□□□ -0.42
Cpsf4Q8BQZ5 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cpsf4Q8BQZ5 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpsf4Q8BQZ5 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.43□□□□□ -0.42
Cpsf4Q8BQZ5 Gm29127-201ENSMUST00000188304 517 ntBASIC12.43□□□□□ -0.42
Cpsf4Q8BQZ5 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.43□□□□□ -0.42
Cpsf4Q8BQZ5 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.43□□□□□ -0.42
Cpsf4Q8BQZ5 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.43□□□□□ -0.42
Cpsf4Q8BQZ5 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Cpsf4Q8BQZ5 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Cpsf4Q8BQZ5 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cpsf4Q8BQZ5 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cpsf4Q8BQZ5 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cpsf4Q8BQZ5 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpsf4Q8BQZ5 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpsf4Q8BQZ5 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cpsf4Q8BQZ5 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpsf4Q8BQZ5 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpsf4Q8BQZ5 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cpsf4Q8BQZ5 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Cpsf4Q8BQZ5 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cpsf4Q8BQZ5 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpsf4Q8BQZ5 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpsf4Q8BQZ5 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpsf4Q8BQZ5 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpsf4Q8BQZ5 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpsf4Q8BQZ5 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cpsf4Q8BQZ5 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpsf4Q8BQZ5 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpsf4Q8BQZ5 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpsf4Q8BQZ5 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cpsf4Q8BQZ5 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Cpsf4Q8BQZ5 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.42□□□□□ -0.42
Cpsf4Q8BQZ5 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpsf4Q8BQZ5 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Cpsf4Q8BQZ5 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpsf4Q8BQZ5 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpsf4Q8BQZ5 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpsf4Q8BQZ5 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.42□□□□□ -0.42
Cpsf4Q8BQZ5 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cpsf4Q8BQZ5 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cpsf4Q8BQZ5 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.42□□□□□ -0.42
Cpsf4Q8BQZ5 Gm24644-201ENSMUST00000157114 139 ntBASIC12.42□□□□□ -0.42
Cpsf4Q8BQZ5 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpsf4Q8BQZ5 Gm29649-201ENSMUST00000185649 419 ntBASIC12.42□□□□□ -0.42
Cpsf4Q8BQZ5 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.42□□□□□ -0.42
Cpsf4Q8BQZ5 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.42□□□□□ -0.42
Cpsf4Q8BQZ5 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Cpsf4Q8BQZ5 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Cpsf4Q8BQZ5 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpsf4Q8BQZ5 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpsf4Q8BQZ5 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Cpsf4Q8BQZ5 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpsf4Q8BQZ5 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpsf4Q8BQZ5 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.42□□□□□ -0.42
Cpsf4Q8BQZ5 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpsf4Q8BQZ5 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cpsf4Q8BQZ5 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpsf4Q8BQZ5 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.42□□□□□ -0.42
Cpsf4Q8BQZ5 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpsf4Q8BQZ5 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cpsf4Q8BQZ5 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cpsf4Q8BQZ5 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.42□□□□□ -0.42
Cpsf4Q8BQZ5 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cpsf4Q8BQZ5 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Gm12203-201ENSMUST00000118235 598 ntBASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Gm12209-201ENSMUST00000120089 596 ntBASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.41□□□□□ -0.42
Cpsf4Q8BQZ5 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms