Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
Smg1Q8BKX6 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smg1Q8BKX6 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Smg1Q8BKX6 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC10.53□□□□□ -0.72
Smg1Q8BKX6 Gm26013-201ENSMUST00000104404 119 ntBASIC10.53□□□□□ -0.72
Smg1Q8BKX6 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC10.53□□□□□ -0.72
Smg1Q8BKX6 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Smg1Q8BKX6 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC10.53□□□□□ -0.72
Smg1Q8BKX6 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC10.53□□□□□ -0.72
Smg1Q8BKX6 Gm43962-201ENSMUST00000203898 190 ntBASIC10.53□□□□□ -0.72
Smg1Q8BKX6 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smg1Q8BKX6 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smg1Q8BKX6 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Smg1Q8BKX6 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Smg1Q8BKX6 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC10.53□□□□□ -0.72
Smg1Q8BKX6 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC10.53□□□□□ -0.72
Smg1Q8BKX6 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smg1Q8BKX6 AC159308.2-201ENSMUST00000213592 2325 ntBASIC10.53□□□□□ -0.72
Smg1Q8BKX6 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Smg1Q8BKX6 Gm23596-201ENSMUST00000104304 132 ntBASIC10.53□□□□□ -0.72
Smg1Q8BKX6 Gm11246-201ENSMUST00000120880 345 ntBASIC10.53□□□□□ -0.72
Smg1Q8BKX6 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC10.53□□□□□ -0.72
Smg1Q8BKX6 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
Smg1Q8BKX6 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC10.53□□□□□ -0.72
Smg1Q8BKX6 Gm21092-201ENSMUST00000178995 955 ntBASIC10.53□□□□□ -0.72
Smg1Q8BKX6 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC10.53□□□□□ -0.72
Smg1Q8BKX6 n-R5s211-201ENSMUST00000093689 119 ntBASIC10.53□□□□□ -0.72
Smg1Q8BKX6 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Smg1Q8BKX6 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smg1Q8BKX6 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smg1Q8BKX6 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smg1Q8BKX6 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smg1Q8BKX6 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smg1Q8BKX6 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC10.53□□□□□ -0.72
Smg1Q8BKX6 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC10.53□□□□□ -0.72
Smg1Q8BKX6 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC10.53□□□□□ -0.72
Smg1Q8BKX6 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smg1Q8BKX6 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Smg1Q8BKX6 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smg1Q8BKX6 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Smg1Q8BKX6 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Smg1Q8BKX6 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC10.53□□□□□ -0.72
Smg1Q8BKX6 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.53□□□□□ -0.72
Smg1Q8BKX6 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Smg1Q8BKX6 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Smg1Q8BKX6 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.72
Smg1Q8BKX6 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Smg1Q8BKX6 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Smg1Q8BKX6 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.72
Smg1Q8BKX6 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC10.52□□□□□ -0.72
Smg1Q8BKX6 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.52□□□□□ -0.72
Smg1Q8BKX6 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Smg1Q8BKX6 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Smg1Q8BKX6 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.52□□□□□ -0.72
Smg1Q8BKX6 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Smg1Q8BKX6 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.72
Smg1Q8BKX6 Gm5525-201ENSMUST00000190438 1312 ntBASIC10.52□□□□□ -0.72
Smg1Q8BKX6 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Smg1Q8BKX6 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Smg1Q8BKX6 Gm5555-201ENSMUST00000120352 1111 ntBASIC10.52□□□□□ -0.72
Smg1Q8BKX6 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Smg1Q8BKX6 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Smg1Q8BKX6 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC10.52□□□□□ -0.72
Smg1Q8BKX6 Mir3060-201ENSMUST00000175339 83 ntBASIC10.52□□□□□ -0.72
Smg1Q8BKX6 Mir6941-201ENSMUST00000184711 59 ntBASIC10.52□□□□□ -0.72
Smg1Q8BKX6 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Smg1Q8BKX6 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Smg1Q8BKX6 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC10.52□□□□□ -0.72
Smg1Q8BKX6 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Smg1Q8BKX6 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
Smg1Q8BKX6 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Smg1Q8BKX6 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC10.52□□□□□ -0.73
Smg1Q8BKX6 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smg1Q8BKX6 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smg1Q8BKX6 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.52□□□□□ -0.73
Smg1Q8BKX6 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Smg1Q8BKX6 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smg1Q8BKX6 Gm12943-201ENSMUST00000119616 210 ntBASIC10.52□□□□□ -0.73
Smg1Q8BKX6 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smg1Q8BKX6 Gm24248-201ENSMUST00000157321 322 ntBASIC10.52□□□□□ -0.73
Smg1Q8BKX6 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Smg1Q8BKX6 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Smg1Q8BKX6 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smg1Q8BKX6 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smg1Q8BKX6 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smg1Q8BKX6 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smg1Q8BKX6 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smg1Q8BKX6 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Smg1Q8BKX6 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smg1Q8BKX6 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Smg1Q8BKX6 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Smg1Q8BKX6 Gm12036-201ENSMUST00000120008 530 ntBASIC10.52□□□□□ -0.73
Smg1Q8BKX6 Gm12291-201ENSMUST00000121627 311 ntBASIC10.52□□□□□ -0.73
Smg1Q8BKX6 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC10.52□□□□□ -0.73
Smg1Q8BKX6 Mir7677-201ENSMUST00000184226 67 ntBASIC10.52□□□□□ -0.73
Smg1Q8BKX6 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Smg1Q8BKX6 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Smg1Q8BKX6 AC165260.2-203ENSMUST00000224237 336 ntBASIC10.52□□□□□ -0.73
Smg1Q8BKX6 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms