Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ubfd1Q78JW9 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.48□□□□□ -0.41
Ubfd1Q78JW9 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ubfd1Q78JW9 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ubfd1Q78JW9 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ubfd1Q78JW9 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ubfd1Q78JW9 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ubfd1Q78JW9 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.48□□□□□ -0.41
Ubfd1Q78JW9 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ubfd1Q78JW9 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ubfd1Q78JW9 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ubfd1Q78JW9 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ubfd1Q78JW9 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Ubfd1Q78JW9 Gm12058-201ENSMUST00000118614 437 ntBASIC12.48□□□□□ -0.41
Ubfd1Q78JW9 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.48□□□□□ -0.41
Ubfd1Q78JW9 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.48□□□□□ -0.41
Ubfd1Q78JW9 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ubfd1Q78JW9 Gm26083-201ENSMUST00000157904 193 ntBASIC12.48□□□□□ -0.41
Ubfd1Q78JW9 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.48□□□□□ -0.41
Ubfd1Q78JW9 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.48□□□□□ -0.41
Ubfd1Q78JW9 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.48□□□□□ -0.41
Ubfd1Q78JW9 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ubfd1Q78JW9 Gm44405-201ENSMUST00000198952 126 ntBASIC12.48□□□□□ -0.41
Ubfd1Q78JW9 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.48□□□□□ -0.41
Ubfd1Q78JW9 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ubfd1Q78JW9 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ubfd1Q78JW9 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ubfd1Q78JW9 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ubfd1Q78JW9 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ubfd1Q78JW9 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Ubfd1Q78JW9 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ubfd1Q78JW9 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ubfd1Q78JW9 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ubfd1Q78JW9 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ubfd1Q78JW9 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ubfd1Q78JW9 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ubfd1Q78JW9 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.47□□□□□ -0.41
Ubfd1Q78JW9 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ubfd1Q78JW9 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ubfd1Q78JW9 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ubfd1Q78JW9 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Ubfd1Q78JW9 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ubfd1Q78JW9 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ubfd1Q78JW9 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.47□□□□□ -0.41
Ubfd1Q78JW9 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ubfd1Q78JW9 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ubfd1Q78JW9 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Ubfd1Q78JW9 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.47□□□□□ -0.41
Ubfd1Q78JW9 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.47□□□□□ -0.41
Ubfd1Q78JW9 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.47□□□□□ -0.41
Ubfd1Q78JW9 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ubfd1Q78JW9 Gm25668-201ENSMUST00000157700 129 ntBASIC12.47□□□□□ -0.41
Ubfd1Q78JW9 Gm16296-201ENSMUST00000159905 325 ntBASIC12.47□□□□□ -0.41
Ubfd1Q78JW9 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ubfd1Q78JW9 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ubfd1Q78JW9 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ubfd1Q78JW9 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ubfd1Q78JW9 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ubfd1Q78JW9 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.47□□□□□ -0.41
Ubfd1Q78JW9 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.47□□□□□ -0.41
Ubfd1Q78JW9 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.47□□□□□ -0.41
Ubfd1Q78JW9 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ubfd1Q78JW9 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.47□□□□□ -0.41
Ubfd1Q78JW9 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Ubfd1Q78JW9 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ubfd1Q78JW9 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ubfd1Q78JW9 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.47□□□□□ -0.41
Ubfd1Q78JW9 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ubfd1Q78JW9 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ubfd1Q78JW9 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.47□□□□□ -0.41
Ubfd1Q78JW9 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ubfd1Q78JW9 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ubfd1Q78JW9 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ubfd1Q78JW9 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ubfd1Q78JW9 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ubfd1Q78JW9 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ubfd1Q78JW9 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ubfd1Q78JW9 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
Ubfd1Q78JW9 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ubfd1Q78JW9 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ubfd1Q78JW9 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ubfd1Q78JW9 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ubfd1Q78JW9 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ubfd1Q78JW9 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ubfd1Q78JW9 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ubfd1Q78JW9 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.46□□□□□ -0.41
Ubfd1Q78JW9 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Ubfd1Q78JW9 Gm31256-201ENSMUST00000194705 506 ntBASIC12.46□□□□□ -0.41
Ubfd1Q78JW9 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.46□□□□□ -0.41
Ubfd1Q78JW9 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.46□□□□□ -0.41
Ubfd1Q78JW9 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.46□□□□□ -0.41
Ubfd1Q78JW9 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ubfd1Q78JW9 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.46□□□□□ -0.41
Ubfd1Q78JW9 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.46□□□□□ -0.41
Ubfd1Q78JW9 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ubfd1Q78JW9 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.46□□□□□ -0.41
Ubfd1Q78JW9 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ubfd1Q78JW9 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.46□□□□□ -0.42
Ubfd1Q78JW9 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ubfd1Q78JW9 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms