Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cspg5Q71M36 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.32□□□□□ -0.28
Cspg5Q71M36 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC13.32□□□□□ -0.28
Cspg5Q71M36 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cspg5Q71M36 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cspg5Q71M36 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.32□□□□□ -0.28
Cspg5Q71M36 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Cspg5Q71M36 Gm3890-201ENSMUST00000182416 207 ntBASIC13.32□□□□□ -0.28
Cspg5Q71M36 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.32□□□□□ -0.28
Cspg5Q71M36 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.32□□□□□ -0.28
Cspg5Q71M36 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cspg5Q71M36 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cspg5Q71M36 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cspg5Q71M36 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cspg5Q71M36 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cspg5Q71M36 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cspg5Q71M36 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.32□□□□□ -0.28
Cspg5Q71M36 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Cspg5Q71M36 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cspg5Q71M36 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.32□□□□□ -0.28
Cspg5Q71M36 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cspg5Q71M36 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Cspg5Q71M36 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cspg5Q71M36 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cspg5Q71M36 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cspg5Q71M36 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cspg5Q71M36 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.32□□□□□ -0.28
Cspg5Q71M36 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cspg5Q71M36 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.32□□□□□ -0.28
Cspg5Q71M36 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Cspg5Q71M36 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cspg5Q71M36 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg5Q71M36 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Cspg5Q71M36 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg5Q71M36 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg5Q71M36 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg5Q71M36 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg5Q71M36 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cspg5Q71M36 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg5Q71M36 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg5Q71M36 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg5Q71M36 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg5Q71M36 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg5Q71M36 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg5Q71M36 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.31□□□□□ -0.28
Cspg5Q71M36 Gm12363-201ENSMUST00000122250 668 ntBASIC13.31□□□□□ -0.28
Cspg5Q71M36 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.31□□□□□ -0.28
Cspg5Q71M36 Gm25668-201ENSMUST00000157700 129 ntBASIC13.31□□□□□ -0.28
Cspg5Q71M36 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.31□□□□□ -0.28
Cspg5Q71M36 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg5Q71M36 Gm7046-201ENSMUST00000221351 977 ntBASIC13.31□□□□□ -0.28
Cspg5Q71M36 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.31□□□□□ -0.28
Cspg5Q71M36 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg5Q71M36 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg5Q71M36 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Cspg5Q71M36 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg5Q71M36 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cspg5Q71M36 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Cspg5Q71M36 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg5Q71M36 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg5Q71M36 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg5Q71M36 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg5Q71M36 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg5Q71M36 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg5Q71M36 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg5Q71M36 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg5Q71M36 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cspg5Q71M36 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cspg5Q71M36 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cspg5Q71M36 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cspg5Q71M36 Gm43289-201ENSMUST00000200537 1475 ntBASIC13.3□□□□□ -0.28
Cspg5Q71M36 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cspg5Q71M36 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cspg5Q71M36 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cspg5Q71M36 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cspg5Q71M36 Gm22323-201ENSMUST00000103832 109 ntBASIC13.3□□□□□ -0.28
Cspg5Q71M36 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cspg5Q71M36 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cspg5Q71M36 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cspg5Q71M36 Gm6447-201ENSMUST00000118905 835 ntBASIC13.3□□□□□ -0.28
Cspg5Q71M36 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.3□□□□□ -0.28
Cspg5Q71M36 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
Cspg5Q71M36 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cspg5Q71M36 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.3□□□□□ -0.28
Cspg5Q71M36 Gm44069-201ENSMUST00000204898 506 ntBASIC13.3□□□□□ -0.28
Cspg5Q71M36 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.3□□□□□ -0.28
Cspg5Q71M36 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.3□□□□□ -0.28
Cspg5Q71M36 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC13.3□□□□□ -0.28
Cspg5Q71M36 Gm19163-201ENSMUST00000223313 780 ntBASIC13.3□□□□□ -0.28
Cspg5Q71M36 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.3□□□□□ -0.28
Cspg5Q71M36 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cspg5Q71M36 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cspg5Q71M36 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Cspg5Q71M36 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cspg5Q71M36 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Cspg5Q71M36 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cspg5Q71M36 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Cspg5Q71M36 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.3□□□□□ -0.28
Cspg5Q71M36 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cspg5Q71M36 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms