Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgb4Q6P8W9 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgb4Q6P8W9 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgb4Q6P8W9 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgb4Q6P8W9 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgb4Q6P8W9 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Hmgb4Q6P8W9 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgb4Q6P8W9 Gm4986-201ENSMUST00000119731 549 ntBASIC13.43□□□□□ -0.26
Hmgb4Q6P8W9 Gm11637-201ENSMUST00000120601 592 ntBASIC13.43□□□□□ -0.26
Hmgb4Q6P8W9 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Hmgb4Q6P8W9 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgb4Q6P8W9 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.43□□□□□ -0.26
Hmgb4Q6P8W9 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgb4Q6P8W9 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.43□□□□□ -0.26
Hmgb4Q6P8W9 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.43□□□□□ -0.26
Hmgb4Q6P8W9 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.43□□□□□ -0.26
Hmgb4Q6P8W9 Gm4768-201ENSMUST00000206199 686 ntBASIC13.43□□□□□ -0.26
Hmgb4Q6P8W9 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.43□□□□□ -0.26
Hmgb4Q6P8W9 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Hmgb4Q6P8W9 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgb4Q6P8W9 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgb4Q6P8W9 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.43□□□□□ -0.26
Hmgb4Q6P8W9 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgb4Q6P8W9 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgb4Q6P8W9 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgb4Q6P8W9 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgb4Q6P8W9 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgb4Q6P8W9 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgb4Q6P8W9 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgb4Q6P8W9 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgb4Q6P8W9 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hmgb4Q6P8W9 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Hmgb4Q6P8W9 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Hmgb4Q6P8W9 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hmgb4Q6P8W9 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hmgb4Q6P8W9 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmgb4Q6P8W9 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Hmgb4Q6P8W9 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmgb4Q6P8W9 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmgb4Q6P8W9 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmgb4Q6P8W9 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmgb4Q6P8W9 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmgb4Q6P8W9 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.42□□□□□ -0.26
Hmgb4Q6P8W9 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmgb4Q6P8W9 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmgb4Q6P8W9 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.42□□□□□ -0.26
Hmgb4Q6P8W9 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmgb4Q6P8W9 Gm15808-201ENSMUST00000119046 604 ntBASIC13.42□□□□□ -0.26
Hmgb4Q6P8W9 Gm13297-201ENSMUST00000120205 934 ntBASIC13.42□□□□□ -0.26
Hmgb4Q6P8W9 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmgb4Q6P8W9 Gm17208-201ENSMUST00000168388 535 ntBASIC13.42□□□□□ -0.26
Hmgb4Q6P8W9 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hmgb4Q6P8W9 Mospd4-201ENSMUST00000180618 576 ntBASIC13.42□□□□□ -0.26
Hmgb4Q6P8W9 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hmgb4Q6P8W9 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC13.42□□□□□ -0.26
Hmgb4Q6P8W9 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmgb4Q6P8W9 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.42□□□□□ -0.26
Hmgb4Q6P8W9 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.42□□□□□ -0.26
Hmgb4Q6P8W9 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hmgb4Q6P8W9 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hmgb4Q6P8W9 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmgb4Q6P8W9 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmgb4Q6P8W9 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmgb4Q6P8W9 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hmgb4Q6P8W9 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hmgb4Q6P8W9 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hmgb4Q6P8W9 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgb4Q6P8W9 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgb4Q6P8W9 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.41□□□□□ -0.26
Hmgb4Q6P8W9 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.41□□□□□ -0.26
Hmgb4Q6P8W9 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgb4Q6P8W9 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgb4Q6P8W9 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgb4Q6P8W9 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgb4Q6P8W9 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.41□□□□□ -0.26
Hmgb4Q6P8W9 Mir877-201ENSMUST00000104738 85 ntBASIC13.41□□□□□ -0.26
Hmgb4Q6P8W9 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgb4Q6P8W9 Gm14381-201ENSMUST00000122105 414 ntBASIC13.41□□□□□ -0.26
Hmgb4Q6P8W9 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgb4Q6P8W9 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC13.41□□□□□ -0.26
Hmgb4Q6P8W9 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgb4Q6P8W9 Gm27320-201ENSMUST00000184892 109 ntBASIC13.41□□□□□ -0.26
Hmgb4Q6P8W9 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.41□□□□□ -0.26
Hmgb4Q6P8W9 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.41□□□□□ -0.26
Hmgb4Q6P8W9 AC093022.1-201ENSMUST00000226949 1072 ntBASIC13.41□□□□□ -0.26
Hmgb4Q6P8W9 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgb4Q6P8W9 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Hmgb4Q6P8W9 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Hmgb4Q6P8W9 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgb4Q6P8W9 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgb4Q6P8W9 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgb4Q6P8W9 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgb4Q6P8W9 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgb4Q6P8W9 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgb4Q6P8W9 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgb4Q6P8W9 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.41□□□□□ -0.26
Hmgb4Q6P8W9 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgb4Q6P8W9 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hmgb4Q6P8W9 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Hmgb4Q6P8W9 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms