Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.5□□□□□ -0.41
Vsx2Q61412 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Vsx2Q61412 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vsx2Q61412 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Vsx2Q61412 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Vsx2Q61412 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vsx2Q61412 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Vsx2Q61412 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Vsx2Q61412 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Vsx2Q61412 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.5□□□□□ -0.41
Vsx2Q61412 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Vsx2Q61412 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.49□□□□□ -0.41
Vsx2Q61412 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vsx2Q61412 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Vsx2Q61412 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vsx2Q61412 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.49□□□□□ -0.41
Vsx2Q61412 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.49□□□□□ -0.41
Vsx2Q61412 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vsx2Q61412 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vsx2Q61412 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vsx2Q61412 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vsx2Q61412 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vsx2Q61412 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vsx2Q61412 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.49□□□□□ -0.41
Vsx2Q61412 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.49□□□□□ -0.41
Vsx2Q61412 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.49□□□□□ -0.41
Vsx2Q61412 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vsx2Q61412 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Vsx2Q61412 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.49□□□□□ -0.41
Vsx2Q61412 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Vsx2Q61412 Gm16177-201ENSMUST00000120728 718 ntBASIC12.49□□□□□ -0.41
Vsx2Q61412 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.49□□□□□ -0.41
Vsx2Q61412 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vsx2Q61412 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Vsx2Q61412 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vsx2Q61412 Gm45784-201ENSMUST00000188360 142 ntBASIC12.49□□□□□ -0.41
Vsx2Q61412 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.49□□□□□ -0.41
Vsx2Q61412 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vsx2Q61412 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Vsx2Q61412 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Vsx2Q61412 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vsx2Q61412 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vsx2Q61412 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vsx2Q61412 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vsx2Q61412 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.49□□□□□ -0.41
Vsx2Q61412 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vsx2Q61412 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vsx2Q61412 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vsx2Q61412 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Vsx2Q61412 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vsx2Q61412 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Vsx2Q61412 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Vsx2Q61412 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.48□□□□□ -0.41
Vsx2Q61412 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Vsx2Q61412 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vsx2Q61412 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Vsx2Q61412 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vsx2Q61412 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vsx2Q61412 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vsx2Q61412 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vsx2Q61412 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vsx2Q61412 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vsx2Q61412 Mir874-201ENSMUST00000104769 76 ntBASIC12.48□□□□□ -0.41
Vsx2Q61412 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.48□□□□□ -0.41
Vsx2Q61412 Gm8805-201ENSMUST00000117848 313 ntBASIC12.48□□□□□ -0.41
Vsx2Q61412 Gm13123-201ENSMUST00000122173 492 ntBASIC12.48□□□□□ -0.41
Vsx2Q61412 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vsx2Q61412 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vsx2Q61412 Gm4271-201ENSMUST00000174444 973 ntBASIC12.48□□□□□ -0.41
Vsx2Q61412 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.48□□□□□ -0.41
Vsx2Q61412 Gm37497-201ENSMUST00000195830 798 ntBASIC12.48□□□□□ -0.41
Vsx2Q61412 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Vsx2Q61412 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.48□□□□□ -0.41
Vsx2Q61412 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vsx2Q61412 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Vsx2Q61412 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Vsx2Q61412 Gm10146-201ENSMUST00000072739 309 ntBASIC12.48□□□□□ -0.41
Vsx2Q61412 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vsx2Q61412 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vsx2Q61412 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vsx2Q61412 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vsx2Q61412 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vsx2Q61412 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vsx2Q61412 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.48□□□□□ -0.41
Vsx2Q61412 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vsx2Q61412 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vsx2Q61412 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vsx2Q61412 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vsx2Q61412 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vsx2Q61412 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vsx2Q61412 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vsx2Q61412 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Vsx2Q61412 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vsx2Q61412 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx2Q61412 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx2Q61412 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx2Q61412 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx2Q61412 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx2Q61412 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vsx2Q61412 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms