Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nr1h4Q60641 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nr1h4Q60641 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.22□□□□□ -0.45
Nr1h4Q60641 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nr1h4Q60641 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nr1h4Q60641 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Nr1h4Q60641 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nr1h4Q60641 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Nr1h4Q60641 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.22□□□□□ -0.45
Nr1h4Q60641 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Nr1h4Q60641 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nr1h4Q60641 Mir7684-201ENSMUST00000183858 60 ntBASIC12.22□□□□□ -0.45
Nr1h4Q60641 Gm28760-201ENSMUST00000185995 736 ntBASIC12.22□□□□□ -0.45
Nr1h4Q60641 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Nr1h4Q60641 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Nr1h4Q60641 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Nr1h4Q60641 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nr1h4Q60641 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.22□□□□□ -0.45
Nr1h4Q60641 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nr1h4Q60641 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nr1h4Q60641 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nr1h4Q60641 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nr1h4Q60641 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nr1h4Q60641 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nr1h4Q60641 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nr1h4Q60641 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nr1h4Q60641 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nr1h4Q60641 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Nr1h4Q60641 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Nr1h4Q60641 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nr1h4Q60641 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.21□□□□□ -0.45
Nr1h4Q60641 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nr1h4Q60641 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nr1h4Q60641 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nr1h4Q60641 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nr1h4Q60641 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nr1h4Q60641 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.21□□□□□ -0.45
Nr1h4Q60641 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nr1h4Q60641 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.21□□□□□ -0.45
Nr1h4Q60641 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nr1h4Q60641 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nr1h4Q60641 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nr1h4Q60641 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nr1h4Q60641 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Nr1h4Q60641 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nr1h4Q60641 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nr1h4Q60641 Gm11978-201ENSMUST00000122315 466 ntBASIC12.21□□□□□ -0.45
Nr1h4Q60641 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nr1h4Q60641 Gm24694-201ENSMUST00000180054 110 ntBASIC12.21□□□□□ -0.45
Nr1h4Q60641 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nr1h4Q60641 Gm27663-201ENSMUST00000184839 110 ntBASIC12.21□□□□□ -0.45
Nr1h4Q60641 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC12.21□□□□□ -0.45
Nr1h4Q60641 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.21□□□□□ -0.45
Nr1h4Q60641 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nr1h4Q60641 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nr1h4Q60641 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nr1h4Q60641 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nr1h4Q60641 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nr1h4Q60641 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.21□□□□□ -0.46
Nr1h4Q60641 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nr1h4Q60641 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.21□□□□□ -0.46
Nr1h4Q60641 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nr1h4Q60641 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Nr1h4Q60641 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nr1h4Q60641 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nr1h4Q60641 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nr1h4Q60641 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Nr1h4Q60641 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nr1h4Q60641 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Nr1h4Q60641 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nr1h4Q60641 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.2□□□□□ -0.46
Nr1h4Q60641 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nr1h4Q60641 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nr1h4Q60641 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nr1h4Q60641 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Nr1h4Q60641 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nr1h4Q60641 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nr1h4Q60641 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nr1h4Q60641 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nr1h4Q60641 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nr1h4Q60641 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nr1h4Q60641 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.2□□□□□ -0.46
Nr1h4Q60641 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nr1h4Q60641 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.2□□□□□ -0.46
Nr1h4Q60641 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Nr1h4Q60641 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.2□□□□□ -0.46
Nr1h4Q60641 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nr1h4Q60641 Mir8102-201ENSMUST00000184148 139 ntBASIC12.2□□□□□ -0.46
Nr1h4Q60641 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.2□□□□□ -0.46
Nr1h4Q60641 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.2□□□□□ -0.46
Nr1h4Q60641 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.2□□□□□ -0.46
Nr1h4Q60641 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.2□□□□□ -0.46
Nr1h4Q60641 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nr1h4Q60641 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Nr1h4Q60641 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nr1h4Q60641 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nr1h4Q60641 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nr1h4Q60641 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nr1h4Q60641 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nr1h4Q60641 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms