Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC9.97□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC9.97□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC9.97□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Gm1995-201ENSMUST00000220838 2602 ntBASIC9.96□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC9.96□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC9.96□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC9.96□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Trav15-1-dv6-1Q5R1D2 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC9.96□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC9.96□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Gm9630-201ENSMUST00000178304 885 ntBASIC9.96□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Gm5312-201ENSMUST00000203728 547 ntBASIC9.96□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC9.96□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC9.95□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Gm6447-201ENSMUST00000118905 835 ntBASIC9.95□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC9.95□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC9.95□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC9.95□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Gm27525-201ENSMUST00000184465 107 ntBASIC9.95□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Gm27430-201ENSMUST00000184585 107 ntBASIC9.95□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC9.95□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Gm29608-201ENSMUST00000190444 463 ntBASIC9.95□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Gm44333-201ENSMUST00000197168 107 ntBASIC9.95□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 AC073947.2-201ENSMUST00000215888 1130 ntBASIC9.95□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Gm5648-201ENSMUST00000122244 1587 ntBASIC9.95□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Gm5053-201ENSMUST00000208361 1678 ntBASIC9.95□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC9.95□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav15-1-dv6-1Q5R1D2 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms