Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn2bQ56A07 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn2bQ56A07 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn2bQ56A07 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn2bQ56A07 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn2bQ56A07 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn2bQ56A07 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.66□□□□□ -0.38
Scn2bQ56A07 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn2bQ56A07 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.66□□□□□ -0.38
Scn2bQ56A07 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn2bQ56A07 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Scn2bQ56A07 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn2bQ56A07 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Scn2bQ56A07 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.66□□□□□ -0.38
Scn2bQ56A07 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.66□□□□□ -0.38
Scn2bQ56A07 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scn2bQ56A07 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.66□□□□□ -0.38
Scn2bQ56A07 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn2bQ56A07 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Scn2bQ56A07 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn2bQ56A07 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Scn2bQ56A07 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Scn2bQ56A07 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn2bQ56A07 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn2bQ56A07 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Scn2bQ56A07 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn2bQ56A07 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Scn2bQ56A07 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.65□□□□□ -0.38
Scn2bQ56A07 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn2bQ56A07 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.65□□□□□ -0.38
Scn2bQ56A07 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.65□□□□□ -0.38
Scn2bQ56A07 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn2bQ56A07 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn2bQ56A07 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.65□□□□□ -0.38
Scn2bQ56A07 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Scn2bQ56A07 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn2bQ56A07 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.65□□□□□ -0.38
Scn2bQ56A07 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn2bQ56A07 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn2bQ56A07 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn2bQ56A07 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Scn2bQ56A07 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn2bQ56A07 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn2bQ56A07 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Scn2bQ56A07 Gm27892-201ENSMUST00000185017 106 ntBASIC12.65□□□□□ -0.38
Scn2bQ56A07 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Scn2bQ56A07 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.65□□□□□ -0.38
Scn2bQ56A07 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.65□□□□□ -0.38
Scn2bQ56A07 Gm44069-201ENSMUST00000204898 506 ntBASIC12.65□□□□□ -0.38
Scn2bQ56A07 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Scn2bQ56A07 Itm2b-204ENSMUST00000228637 783 ntBASIC12.65□□□□□ -0.38
Scn2bQ56A07 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn2bQ56A07 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Scn2bQ56A07 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Scn2bQ56A07 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn2bQ56A07 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn2bQ56A07 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Scn2bQ56A07 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn2bQ56A07 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.65□□□□□ -0.38
Scn2bQ56A07 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.65□□□□□ -0.38
Scn2bQ56A07 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn2bQ56A07 Matn2-203ENSMUST00000226766 3252 ntBASIC12.65□□□□□ -0.38
Scn2bQ56A07 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn2bQ56A07 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn2bQ56A07 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn2bQ56A07 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn2bQ56A07 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn2bQ56A07 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Scn2bQ56A07 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Scn2bQ56A07 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Scn2bQ56A07 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Scn2bQ56A07 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn2bQ56A07 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.64□□□□□ -0.39
Scn2bQ56A07 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn2bQ56A07 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn2bQ56A07 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn2bQ56A07 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn2bQ56A07 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn2bQ56A07 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn2bQ56A07 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn2bQ56A07 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn2bQ56A07 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn2bQ56A07 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn2bQ56A07 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn2bQ56A07 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.64□□□□□ -0.39
Scn2bQ56A07 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Scn2bQ56A07 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.64□□□□□ -0.39
Scn2bQ56A07 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.64□□□□□ -0.39
Scn2bQ56A07 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Scn2bQ56A07 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.64□□□□□ -0.39
Scn2bQ56A07 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Scn2bQ56A07 Gm38671-201ENSMUST00000200573 130 ntBASIC12.64□□□□□ -0.39
Scn2bQ56A07 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.64□□□□□ -0.39
Scn2bQ56A07 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.64□□□□□ -0.39
Scn2bQ56A07 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn2bQ56A07 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn2bQ56A07 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn2bQ56A07 Pck2-205ENSMUST00000226352 2784 ntBASIC12.64□□□□□ -0.39
Scn2bQ56A07 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Scn2bQ56A07 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms