Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upf3aQ3ULJ3 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Upf3aQ3ULJ3 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Upf3aQ3ULJ3 Gm12015-201ENSMUST00000117065 843 ntBASIC13.45□□□□□ -0.26
Upf3aQ3ULJ3 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC13.45□□□□□ -0.26
Upf3aQ3ULJ3 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.45□□□□□ -0.26
Upf3aQ3ULJ3 Gm6963-201ENSMUST00000147879 379 ntBASIC13.45□□□□□ -0.26
Upf3aQ3ULJ3 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Upf3aQ3ULJ3 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.45□□□□□ -0.26
Upf3aQ3ULJ3 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Upf3aQ3ULJ3 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.45□□□□□ -0.26
Upf3aQ3ULJ3 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.45□□□□□ -0.26
Upf3aQ3ULJ3 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upf3aQ3ULJ3 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Upf3aQ3ULJ3 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Upf3aQ3ULJ3 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upf3aQ3ULJ3 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.45□□□□□ -0.26
Upf3aQ3ULJ3 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upf3aQ3ULJ3 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.45□□□□□ -0.26
Upf3aQ3ULJ3 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.45□□□□□ -0.26
Upf3aQ3ULJ3 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upf3aQ3ULJ3 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upf3aQ3ULJ3 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upf3aQ3ULJ3 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.45□□□□□ -0.26
Upf3aQ3ULJ3 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Upf3aQ3ULJ3 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upf3aQ3ULJ3 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Upf3aQ3ULJ3 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Upf3aQ3ULJ3 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Upf3aQ3ULJ3 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Upf3aQ3ULJ3 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upf3aQ3ULJ3 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upf3aQ3ULJ3 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upf3aQ3ULJ3 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upf3aQ3ULJ3 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.45□□□□□ -0.26
Upf3aQ3ULJ3 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.45□□□□□ -0.26
Upf3aQ3ULJ3 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Upf3aQ3ULJ3 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Upf3aQ3ULJ3 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upf3aQ3ULJ3 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upf3aQ3ULJ3 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Upf3aQ3ULJ3 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Upf3aQ3ULJ3 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upf3aQ3ULJ3 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upf3aQ3ULJ3 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Upf3aQ3ULJ3 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upf3aQ3ULJ3 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Upf3aQ3ULJ3 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upf3aQ3ULJ3 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upf3aQ3ULJ3 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upf3aQ3ULJ3 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Upf3aQ3ULJ3 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC13.44□□□□□ -0.26
Upf3aQ3ULJ3 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Upf3aQ3ULJ3 Gm13813-201ENSMUST00000120998 787 ntBASIC13.44□□□□□ -0.26
Upf3aQ3ULJ3 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC13.44□□□□□ -0.26
Upf3aQ3ULJ3 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.44□□□□□ -0.26
Upf3aQ3ULJ3 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Upf3aQ3ULJ3 Gm42997-202ENSMUST00000200321 985 ntBASIC13.44□□□□□ -0.26
Upf3aQ3ULJ3 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Upf3aQ3ULJ3 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Upf3aQ3ULJ3 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upf3aQ3ULJ3 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upf3aQ3ULJ3 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upf3aQ3ULJ3 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upf3aQ3ULJ3 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upf3aQ3ULJ3 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Upf3aQ3ULJ3 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.44□□□□□ -0.26
Upf3aQ3ULJ3 CU062626.3-201ENSMUST00000225522 1411 ntBASIC13.44□□□□□ -0.26
Upf3aQ3ULJ3 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upf3aQ3ULJ3 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upf3aQ3ULJ3 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upf3aQ3ULJ3 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upf3aQ3ULJ3 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upf3aQ3ULJ3 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.44□□□□□ -0.26
Upf3aQ3ULJ3 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upf3aQ3ULJ3 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upf3aQ3ULJ3 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Upf3aQ3ULJ3 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.44□□□□□ -0.26
Upf3aQ3ULJ3 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upf3aQ3ULJ3 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Upf3aQ3ULJ3 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.43□□□□□ -0.26
Upf3aQ3ULJ3 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Upf3aQ3ULJ3 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Upf3aQ3ULJ3 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC13.43□□□□□ -0.26
Upf3aQ3ULJ3 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
Upf3aQ3ULJ3 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Upf3aQ3ULJ3 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
Upf3aQ3ULJ3 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Upf3aQ3ULJ3 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Upf3aQ3ULJ3 Gm5070-201ENSMUST00000177599 862 ntBASIC13.43□□□□□ -0.26
Upf3aQ3ULJ3 Gm28882-201ENSMUST00000185504 314 ntBASIC13.43□□□□□ -0.26
Upf3aQ3ULJ3 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC13.43□□□□□ -0.26
Upf3aQ3ULJ3 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Upf3aQ3ULJ3 Ighv5-7-201ENSMUST00000192302 244 ntBASIC13.43□□□□□ -0.26
Upf3aQ3ULJ3 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.43□□□□□ -0.26
Upf3aQ3ULJ3 Gm45433-201ENSMUST00000209386 247 ntBASIC13.43□□□□□ -0.26
Upf3aQ3ULJ3 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
Upf3aQ3ULJ3 Gm39404-201ENSMUST00000216350 313 ntBASIC13.43□□□□□ -0.26
Upf3aQ3ULJ3 CT025694.1-201ENSMUST00000226188 934 ntBASIC13.43□□□□□ -0.26
Upf3aQ3ULJ3 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms