Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Gm37852-201ENSMUST00000193027 350 ntBASIC11.7□□□□□ -0.54
Spg11Q3UHA3 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Spg11Q3UHA3 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Gm22133-201ENSMUST00000102082 109 ntBASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Gm24891-201ENSMUST00000104391 136 ntBASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Tsc22d3-204ENSMUST00000123898 952 ntTSL 5 BASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Gm3329-201ENSMUST00000159873 556 ntBASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Gm5700-201ENSMUST00000191483 989 ntBASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Gm16011-201ENSMUST00000121567 2662 ntBASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Spg11Q3UHA3 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Spg11Q3UHA3 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Spg11Q3UHA3 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Spg11Q3UHA3 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Spg11Q3UHA3 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Spg11Q3UHA3 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Spg11Q3UHA3 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Spg11Q3UHA3 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Spg11Q3UHA3 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Spg11Q3UHA3 CT485606.1-201ENSMUST00000213187 878 ntBASIC11.69□□□□□ -0.54
Spg11Q3UHA3 Gm4930-201ENSMUST00000219926 1087 ntBASIC11.69□□□□□ -0.54
Spg11Q3UHA3 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC11.69□□□□□ -0.54
Spg11Q3UHA3 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Spg11Q3UHA3 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Spg11Q3UHA3 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Spg11Q3UHA3 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Spg11Q3UHA3 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Spg11Q3UHA3 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Spg11Q3UHA3 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Spg11Q3UHA3 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Spg11Q3UHA3 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Spg11Q3UHA3 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Spg11Q3UHA3 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Spg11Q3UHA3 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Spg11Q3UHA3 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Spg11Q3UHA3 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC11.69□□□□□ -0.54
Spg11Q3UHA3 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Spg11Q3UHA3 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Spg11Q3UHA3 Gm22920-201ENSMUST00000102175 109 ntBASIC11.69□□□□□ -0.54
Spg11Q3UHA3 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC11.69□□□□□ -0.54
Spg11Q3UHA3 Gm11942-201ENSMUST00000180255 345 ntBASIC11.69□□□□□ -0.54
Spg11Q3UHA3 Gm9625-201ENSMUST00000180422 955 ntBASIC11.69□□□□□ -0.54
Spg11Q3UHA3 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC11.69□□□□□ -0.54
Spg11Q3UHA3 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC11.69□□□□□ -0.54
Spg11Q3UHA3 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC11.69□□□□□ -0.54
Spg11Q3UHA3 AC102368.1-201ENSMUST00000227161 892 ntBASIC11.69□□□□□ -0.54
Spg11Q3UHA3 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Spg11Q3UHA3 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Spg11Q3UHA3 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Spg11Q3UHA3 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Spg11Q3UHA3 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Spg11Q3UHA3 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Spg11Q3UHA3 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Spg11Q3UHA3 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC11.69□□□□□ -0.54
Spg11Q3UHA3 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Spg11Q3UHA3 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Spg11Q3UHA3 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Spg11Q3UHA3 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Spg11Q3UHA3 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms