Protein–RNA interactions for Protein: Q3U2A8

Vars2, Valine--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vars2Q3U2A8 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vars2Q3U2A8 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vars2Q3U2A8 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vars2Q3U2A8 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC15.73■□□□□ 0.11
Vars2Q3U2A8 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vars2Q3U2A8 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vars2Q3U2A8 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vars2Q3U2A8 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vars2Q3U2A8 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vars2Q3U2A8 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC15.73■□□□□ 0.11
Vars2Q3U2A8 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vars2Q3U2A8 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vars2Q3U2A8 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
Vars2Q3U2A8 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vars2Q3U2A8 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vars2Q3U2A8 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vars2Q3U2A8 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vars2Q3U2A8 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vars2Q3U2A8 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Vars2Q3U2A8 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Vars2Q3U2A8 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vars2Q3U2A8 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vars2Q3U2A8 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vars2Q3U2A8 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vars2Q3U2A8 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC15.72■□□□□ 0.11
Vars2Q3U2A8 Gm43186-201ENSMUST00000198130 824 ntBASIC15.72■□□□□ 0.11
Vars2Q3U2A8 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC15.72■□□□□ 0.11
Vars2Q3U2A8 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Vars2Q3U2A8 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Vars2Q3U2A8 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vars2Q3U2A8 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Vars2Q3U2A8 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Vars2Q3U2A8 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vars2Q3U2A8 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Vars2Q3U2A8 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vars2Q3U2A8 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vars2Q3U2A8 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vars2Q3U2A8 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC15.72■□□□□ 0.11
Vars2Q3U2A8 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC15.72■□□□□ 0.11
Vars2Q3U2A8 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
Vars2Q3U2A8 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vars2Q3U2A8 Gm44094-201ENSMUST00000204703 2030 ntBASIC15.72■□□□□ 0.11
Vars2Q3U2A8 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Vars2Q3U2A8 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vars2Q3U2A8 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vars2Q3U2A8 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vars2Q3U2A8 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vars2Q3U2A8 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vars2Q3U2A8 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vars2Q3U2A8 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vars2Q3U2A8 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vars2Q3U2A8 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vars2Q3U2A8 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vars2Q3U2A8 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC15.71■□□□□ 0.11
Vars2Q3U2A8 Gm13916-201ENSMUST00000117368 628 ntBASIC15.71■□□□□ 0.11
Vars2Q3U2A8 Gm15725-201ENSMUST00000119947 1090 ntBASIC15.71■□□□□ 0.11
Vars2Q3U2A8 Gm12990-201ENSMUST00000120372 468 ntBASIC15.71■□□□□ 0.11
Vars2Q3U2A8 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC15.71■□□□□ 0.11
Vars2Q3U2A8 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC15.71■□□□□ 0.11
Vars2Q3U2A8 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vars2Q3U2A8 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vars2Q3U2A8 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC15.71■□□□□ 0.11
Vars2Q3U2A8 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vars2Q3U2A8 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Vars2Q3U2A8 Gm17877-201ENSMUST00000192578 814 ntBASIC15.71■□□□□ 0.11
Vars2Q3U2A8 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vars2Q3U2A8 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC15.71■□□□□ 0.11
Vars2Q3U2A8 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vars2Q3U2A8 CT571245.2-201ENSMUST00000218421 305 ntBASIC15.71■□□□□ 0.11
Vars2Q3U2A8 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC15.71■□□□□ 0.11
Vars2Q3U2A8 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vars2Q3U2A8 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vars2Q3U2A8 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC15.71■□□□□ 0.11
Vars2Q3U2A8 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vars2Q3U2A8 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vars2Q3U2A8 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Vars2Q3U2A8 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Vars2Q3U2A8 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vars2Q3U2A8 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vars2Q3U2A8 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vars2Q3U2A8 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vars2Q3U2A8 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vars2Q3U2A8 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vars2Q3U2A8 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Vars2Q3U2A8 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vars2Q3U2A8 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vars2Q3U2A8 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Vars2Q3U2A8 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vars2Q3U2A8 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.7■□□□□ 0.1
Vars2Q3U2A8 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vars2Q3U2A8 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Vars2Q3U2A8 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vars2Q3U2A8 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vars2Q3U2A8 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vars2Q3U2A8 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vars2Q3U2A8 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Vars2Q3U2A8 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vars2Q3U2A8 Gm26013-201ENSMUST00000104404 119 ntBASIC15.7■□□□□ 0.1
Vars2Q3U2A8 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC15.7■□□□□ 0.1
Vars2Q3U2A8 Gm13549-201ENSMUST00000118339 796 ntBASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms