Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Fndc4Q3TR08 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Fndc4Q3TR08 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Fndc4Q3TR08 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Fndc4Q3TR08 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Fndc4Q3TR08 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Fndc4Q3TR08 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Fndc4Q3TR08 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Fndc4Q3TR08 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Fndc4Q3TR08 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Fndc4Q3TR08 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Fndc4Q3TR08 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Fndc4Q3TR08 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Fndc4Q3TR08 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Fndc4Q3TR08 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Fndc4Q3TR08 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Fndc4Q3TR08 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Fndc4Q3TR08 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Fndc4Q3TR08 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Fndc4Q3TR08 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Fndc4Q3TR08 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Fndc4Q3TR08 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC10.93□□□□□ -0.66
Fndc4Q3TR08 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Fndc4Q3TR08 AC135669.1-201ENSMUST00000213585 412 ntBASIC10.93□□□□□ -0.66
Fndc4Q3TR08 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Fndc4Q3TR08 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Fndc4Q3TR08 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Fndc4Q3TR08 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC10.93□□□□□ -0.66
Fndc4Q3TR08 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Fndc4Q3TR08 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Fndc4Q3TR08 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Fndc4Q3TR08 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Fndc4Q3TR08 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Fndc4Q3TR08 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Fndc4Q3TR08 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Fndc4Q3TR08 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Fndc4Q3TR08 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Fndc4Q3TR08 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Fndc4Q3TR08 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Fndc4Q3TR08 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
Fndc4Q3TR08 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Fndc4Q3TR08 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Fndc4Q3TR08 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Fndc4Q3TR08 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Fndc4Q3TR08 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Fndc4Q3TR08 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Fndc4Q3TR08 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Fndc4Q3TR08 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC10.92□□□□□ -0.66
Fndc4Q3TR08 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Fndc4Q3TR08 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Fndc4Q3TR08 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Fndc4Q3TR08 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Fndc4Q3TR08 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Fndc4Q3TR08 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Fndc4Q3TR08 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.92□□□□□ -0.66
Fndc4Q3TR08 Mir874-201ENSMUST00000104769 76 ntBASIC10.92□□□□□ -0.66
Fndc4Q3TR08 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Fndc4Q3TR08 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC10.92□□□□□ -0.66
Fndc4Q3TR08 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Fndc4Q3TR08 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Fndc4Q3TR08 Gm37917-201ENSMUST00000194711 392 ntBASIC10.92□□□□□ -0.66
Fndc4Q3TR08 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC10.92□□□□□ -0.66
Fndc4Q3TR08 AC154687.2-201ENSMUST00000223853 640 ntBASIC10.92□□□□□ -0.66
Fndc4Q3TR08 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Fndc4Q3TR08 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Fndc4Q3TR08 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC10.92□□□□□ -0.66
Fndc4Q3TR08 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC10.92□□□□□ -0.66
Fndc4Q3TR08 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.92□□□□□ -0.66
Fndc4Q3TR08 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.92□□□□□ -0.66
Fndc4Q3TR08 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Fndc4Q3TR08 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.92□□□□□ -0.66
Fndc4Q3TR08 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Fndc4Q3TR08 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Fndc4Q3TR08 AC154527.2-201ENSMUST00000225256 1466 ntBASIC10.92□□□□□ -0.66
Fndc4Q3TR08 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Fndc4Q3TR08 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Fndc4Q3TR08 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Fndc4Q3TR08 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC10.92□□□□□ -0.66
Fndc4Q3TR08 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Fndc4Q3TR08 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Fndc4Q3TR08 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Fndc4Q3TR08 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Fndc4Q3TR08 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Fndc4Q3TR08 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Fndc4Q3TR08 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC10.92□□□□□ -0.66
Fndc4Q3TR08 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Fndc4Q3TR08 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Fndc4Q3TR08 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Fndc4Q3TR08 Gm21038-201ENSMUST00000222205 1383 ntBASIC10.91□□□□□ -0.66
Fndc4Q3TR08 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Fndc4Q3TR08 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Fndc4Q3TR08 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC10.91□□□□□ -0.66
Fndc4Q3TR08 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Fndc4Q3TR08 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Fndc4Q3TR08 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
Fndc4Q3TR08 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Fndc4Q3TR08 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Fndc4Q3TR08 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Fndc4Q3TR08 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Fndc4Q3TR08 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms