Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.59□□□□□ -0.23
Trim43aQ3TL54 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43aQ3TL54 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43aQ3TL54 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43aQ3TL54 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.59□□□□□ -0.23
Trim43aQ3TL54 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.59□□□□□ -0.23
Trim43aQ3TL54 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.59□□□□□ -0.23
Trim43aQ3TL54 Gm8515-201ENSMUST00000194852 576 ntBASIC13.59□□□□□ -0.23
Trim43aQ3TL54 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.59□□□□□ -0.23
Trim43aQ3TL54 Gm18018-201ENSMUST00000198273 408 ntBASIC13.59□□□□□ -0.23
Trim43aQ3TL54 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43aQ3TL54 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Trim43aQ3TL54 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43aQ3TL54 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trim43aQ3TL54 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43aQ3TL54 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.59□□□□□ -0.23
Trim43aQ3TL54 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43aQ3TL54 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Trim43aQ3TL54 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43aQ3TL54 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43aQ3TL54 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43aQ3TL54 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trim43aQ3TL54 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim43aQ3TL54 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim43aQ3TL54 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.58□□□□□ -0.23
Trim43aQ3TL54 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trim43aQ3TL54 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.58□□□□□ -0.23
Trim43aQ3TL54 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Trim43aQ3TL54 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43aQ3TL54 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.58□□□□□ -0.24
Trim43aQ3TL54 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Trim43aQ3TL54 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43aQ3TL54 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43aQ3TL54 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43aQ3TL54 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trim43aQ3TL54 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43aQ3TL54 Gm13813-201ENSMUST00000120998 787 ntBASIC13.58□□□□□ -0.24
Trim43aQ3TL54 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Trim43aQ3TL54 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43aQ3TL54 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43aQ3TL54 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43aQ3TL54 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.58□□□□□ -0.24
Trim43aQ3TL54 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43aQ3TL54 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43aQ3TL54 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43aQ3TL54 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43aQ3TL54 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43aQ3TL54 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trim43aQ3TL54 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43aQ3TL54 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43aQ3TL54 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trim43aQ3TL54 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43aQ3TL54 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43aQ3TL54 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43aQ3TL54 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trim43aQ3TL54 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43aQ3TL54 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43aQ3TL54 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43aQ3TL54 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trim43aQ3TL54 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trim43aQ3TL54 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trim43aQ3TL54 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43aQ3TL54 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.58□□□□□ -0.24
Trim43aQ3TL54 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43aQ3TL54 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43aQ3TL54 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43aQ3TL54 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43aQ3TL54 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trim43aQ3TL54 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Trim43aQ3TL54 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43aQ3TL54 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43aQ3TL54 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.57□□□□□ -0.24
Trim43aQ3TL54 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43aQ3TL54 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43aQ3TL54 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trim43aQ3TL54 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.57□□□□□ -0.24
Trim43aQ3TL54 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43aQ3TL54 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43aQ3TL54 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43aQ3TL54 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trim43aQ3TL54 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43aQ3TL54 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trim43aQ3TL54 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.57□□□□□ -0.24
Trim43aQ3TL54 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.57□□□□□ -0.24
Trim43aQ3TL54 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43aQ3TL54 Gm5354-201ENSMUST00000182417 973 ntBASIC13.57□□□□□ -0.24
Trim43aQ3TL54 Gm5745-201ENSMUST00000183748 313 ntBASIC13.57□□□□□ -0.24
Trim43aQ3TL54 Gm38223-201ENSMUST00000194484 695 ntBASIC13.57□□□□□ -0.24
Trim43aQ3TL54 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43aQ3TL54 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.57□□□□□ -0.24
Trim43aQ3TL54 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.57□□□□□ -0.24
Trim43aQ3TL54 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.57□□□□□ -0.24
Trim43aQ3TL54 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.57□□□□□ -0.24
Trim43aQ3TL54 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.57□□□□□ -0.24
Trim43aQ3TL54 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43aQ3TL54 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trim43aQ3TL54 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43aQ3TL54 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trim43aQ3TL54 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim43aQ3TL54 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms